YRC Public Data Repository - Protein Structure Prediction

Protein:	4EBP2_MOUSE
Organism:	Mus musculus
Length:	120 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 4EBP2_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|71682965, gi\|... - gi\|74271859\|ref\|NP_001028241.1\| eukaryotic translation initiation factor 4E binding protein 2 [Rattu...	192.0	[0..1]	[120..1]
gi\|74228893 - gi\|74228893\|dbj\|BAE21923.1\| unnamed protein product [Mus musculus]	191.0	[0..1]	[120..1]
EIF4EBP2 - eukaryotic translation initiation factor 4E binding protein 2 gi\|55634971 - gi\|55634971\|ref\|XP_508163.1\| PREDICTED: similar to Eukaryotic translation initiation factor 4E bindi... ENSMMUT000000325... - null, null gi\|60656297, gi\|... - gi\|60656299\|gb\|AAX32713.1\| eukaryotic translation initiation factor 4E binding protein 2 [synthetic ...	190.0	[0..1]	[120..1]
tr\|G1SJT0\|G1SJT0... - pep:novel chromosome:oryCun2:18:16549838:16567388:-1 gene:ENSOCUG00000003475 transcript:ENSOCUT00000... gi\|119918532 - gi\|119918532\|ref\|XP_001250585.1\| PREDICTED: similar to Eukaryotic translation initiation factor 4E-b... gi\|73953390 - gi\|73953390\|ref\|XP_546145.2\| PREDICTED: similar to Eukaryotic translation initiation factor 4E bindi...	187.0	[0..1]	[120..1]
gi\|39794331, gi\|... - gi\|45361513\|ref\|NP_989333.1\| eukaryotic translation initiation factor 4E binding protein 2 [Xenopus ...	173.0	[0..6]	[120..2]
gi\|148236683, gi... - gi\|49670444\|gb\|AAH75198.1\| MGC83416 protein [Xenopus laevis], gi\|148236683\|ref\|NP_001086480.1\| MGC83...	171.0	[0..6]	[120..2]
gi\|47086433, gi\|... - gi\|47086433\|ref\|NP_997968.1\| eukaryotic translation initiation factor 4E binding protein 2 [Danio re...	171.0	[0..6]	[120..2]
gi\|47223260 - gi\|47223260\|emb\|CAF98644.1\| unnamed protein product [Tetraodon nigroviridis]	166.0	[0..8]	[120..2]

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Predicted Domain #1

Region A:
Residues: [1-120]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASAGGSHQ PSQSRAIPTR TVAISDAAQL PQDYCTTPGG TLFSTTPGGT RIIYDRKFLL  60
   61 DRRNSPMAQT PPCHLPNIPG VTSPGALIED SKVEVNNLNN LNNHDRKHAV GDEAQFEMDI 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	90.187087
Match:	PF05456.2
Description:	No description for PF05456.2 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits