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View Structure Prediction Details

Protein: CRK13_ARATH
Organism: Arabidopsis thaliana
Length: 673 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CRK13_ARATH.

Predicted Domain #1
Region A:
Residues: [1-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRSLLSIL CFILLASGVA SVSAQTCIEN RKYFTPNGTY DSNRRLILSS LPNNTASRDG  60
   61 FYYGSIGEEQ DRVYALGMCI PKSTPSDCSN CIKGAAGWLI QDCVNQTDAY YWALDPTLCL 120
  121 VRYSNISFSG SAAFWEIEPQ YLVLNTATIA SNLTEFKTIW EDLTSRTITA ASAARSTPSS 180
  181 SDNHYRVDFA NLTKFQNIYA LMQCTPDISS DECNNCLQRG VLEYQSCCGN NTGGYVMRPI 240
  241 CFFRWQLFTF SKAFHNITLA TTPPLSPPPL QRPVVASQPP SADNRDKKRD NSSGKISMKT 300
  301 ILAIVVVGIV ILIIISGILA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.09691
Match: 1ogqA
Description: Polygalacturonase inhibiting protein PGIP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [321-673]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRFARKEKPY QEVELNQTGI TSVRSLQYKF KTIETATNNF SERLGHGGSG HVFKGRLPDG  60
   61 KEIAVKRLSE KTEQSKKEFK NEVVLVAKLQ HRNLVRLLGF SVKGEEKIIV YEYLPNRSLD 120
  121 YILFDPTKQG ELDWKKRYKI IGGTARGILY LHQDSQPTII HRDLKAGNIL LDAHMNPKVA 180
  181 DFGTARIFGM DQSVAITANA AGTPGYMAPE YMELGEFSMK SDVYSYGVLV LEIICGKRNT 240
  241 SFSSPVQNFV TYVWRLWKSG TPLNLVDATI AENYKSEEVI RCIHIALLCV QEEPTDRPDF 300
  301 SIIMSMLTSN SLILPVPKPP PSFIPGRPNQ STTRPSSQNI NDGRWSLLKM MFH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle