YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|22538478, gi\|...
Organism:	Homo sapiens
Length:	236 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22538478, gi|....

Description	E-value	Query Range	Subject Range
gi\|56238096, gi\|... - gi\|74227513\|dbj\|BAE21818.1\| unnamed protein product [Mus musculus], gi\|56238096\|emb\|CAI25927.1\| phos...	0.0	[1..236]	[1..236]
gi\|73956258 - gi\|73956258\|ref\|XP_536665.2\| PREDICTED: similar to phosphatidylethanolamine N-methyltransferase isof...	0.0	[13..236]	[2..225]
gi\|12653567 - gi\|12653567\|gb\|AAH00557.1\| Phosphatidylethanolamine N-methyltransferase [Homo sapiens]	0.0	[1..236]	[1..236]
gi\|114668891, gi... - gi\|55644959\|ref\|XP_511313.1\| PREDICTED: phosphatidylethanolamine N-methyltransferase isoform 5 [Pan ...	0.0	[1..236]	[1..236]
gi\|109113473 - gi\|109113473\|ref\|XP_001090779.1\| PREDICTED: phosphatidylethanolamine N-methyltransferase isoform 3 [...	0.0	[1..236]	[1..236]
gi\|28279539, gi\|... - gi\|41055853\|ref\|NP_956452.1\| phosphatidylethanolamine N-methyltransferase [Danio rerio], gi\|28279539...	1.0E-97	[18..234]	[12..229]
PEMT_BOVIN - Phosphatidylethanolamine N-methyltransferase OS=Bos taurus GN=PEMT PE=2 SV=1	5.0E-93	[38..236]	[1..199]
gi\|33243044, gi\|... - gi\|47523788\|ref\|NP_999530.1\| phosphatidylethanolamine N-methyltransferase [Sus scrofa], gi\|33243044\|...	5.0E-92	[38..236]	[1..199]

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Predicted Domain #1

Region A:
Residues: [1-236]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSGNPGAE VTNSSVAGPD CCGGLGNIDF RQADFCVMTR LLGYVDPLDP SFVAAVITIT  60
   61 FNPLYWNVVA RWEHKTRKLS RAFGSPYLAC YSLSVTILLL NFLRSHCFTQ AMLSQPRMES 120
  121 LDTPAAYSLG LALLGLGVVL VLSSFFALGF AGTFLGDYFG ILKEARVTVF PFNILDNPMY 180
  181 WGSTANYLGW AIMHASPTGL LLTVLVALTY IVALLYEEPF TAEIYRQKAS GSHKRS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	156.79588
Match:	PF04191.4
Description:	No description for PF04191.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits