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View Structure Prediction Details

Protein: TMEM110
Organism: Homo sapiens
Length: 294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TMEM110.

Description E-value Query
Range
Subject
Range
gi|114587240 - gi|114587240|ref|XP_001152909.1| PREDICTED: similar to Transmembrane protein 110 [Pan troglodytes]
0.0 [1..293] [192..484]
gi|109039141 - gi|109039141|ref|XP_001085822.1| PREDICTED: hypothetical protein isoform 1 [Macaca mulatta]
0.0 [1..293] [1..293]
gi|111305243, gi... - gi|115497806|ref|NP_001069585.1| transmembrane protein 110 [Bos taurus], gi|111305243|gb|AAI20362.1|...
0.0 [1..294] [1..294]
STIMA_RAT - Store-operated calcium entry regulator STIMATE OS=Rattus norvegicus GN=Tmem110 PE=2 SV=1
0.0 [1..294] [1..288]
STIMA_MOUSE - Store-operated calcium entry regulator STIMATE OS=Mus musculus GN=Tmem110 PE=2 SV=1
0.0 [1..294] [1..288]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGPAGNASR GLPGGPPSTV ASGAGRCESG ALMHSFGIFL QGLLGVVAFS TLMLKRFREP  60
   61 KHERRPWRIW FLDTSKQAIG MLFIHFANVY LADLTEEDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSLYLINFLL DATVGMLLIY VGVRAVSVLV EWQQWESLRF GEYGDPLQCG AWVGQCALYI  60
   61 VIMIFEKSVV FIVLLILQWK KVALLNPIEN PDLKLAIVML IVPFFVNALM FWVVDNFLMR 120
  121 KGKTKAKLEE RGANQDSRNG SKVRYRRAAS HEESESEILI SADDEMEESD VEEDLRRLTP 180
  181 LKPVKKKKHR FGLPV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle