YRC Public Data Repository - Protein Structure Prediction

Protein:	MOV10
Organism:	Homo sapiens
Length:	1003 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MOV10.

Description	E-value	Query Range	Subject Range
gi\|109467355, gi... - gi\|157819123\|ref\|NP_001101181.1\| Moloney leukemia virus 10 [Rattus norvegicus], gi\|149030415\|gb\|EDL8...	0.0	[1..1003]	[1..1004]
gi\|6678920, gi\|1... - gi\|6678920\|ref\|NP_032645.1\| Moloney leukemia virus 10 [Mus musculus], gi\|53169\|emb\|CAA36803.1\| GTP b...	0.0	[1..1003]	[1..1004]
gi\|109013622, gi... - gi\|109013625\|ref\|XP_001108588.1\| PREDICTED: similar to Mov10, Moloney leukemia virus 10, homolog iso...	0.0	[1..1003]	[1..1003]
gi\|73981618 - gi\|73981618\|ref\|XP_540337.2\| PREDICTED: similar to Mov10, Moloney leukemia virus 10, homolog [Canis ...	0.0	[3..1003]	[131..1131]
gi\|114559080 - gi\|114559080\|ref\|XP_513630.2\| PREDICTED: Mov10, Moloney leukemia virus 10, homolog [Pan troglodytes]	0.0	[1..1003]	[1..1028]
MOV10_BOVIN - Putative helicase MOV-10 OS=Bos taurus GN=MOV10 PE=2 SV=1	0.0	[1..1003]	[1..1003]

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Predicted Domain #1

Region A:
Residues: [1-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKFSCRQL REAGQCFESF LVVRGLDMET DRERLRTIYN RDFKISFGTP APGFSSMLYG  60
   61 MKIANLAYVT KTRVRFFRLD RWADVRFPEK RRMKLGSDIS KHHKSLLAKI FYDRAEYLHG 120
  121 KHGVDVEVQG PHEARDGQLL IRLDLNRKEV LTLRLRNGGT QSVTLTHLFP LCRTPQFAFY 180
  181 NEDQELPCP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [190-330]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGPGECYELH VHCKTSFVGY FPATVLWELL GPGESGSEGA GTFYIARFLA AVAHSPLAAQ  60
   61 LKPMTPFKRT RITGNPVVTN RIEEGERPDR AKGYDLELSM ALGTYYPPPR LRQLLPMLLQ 120
  121 GTSIFTAPKE IAEIKAQLET A

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	15.522879
Match:	2iykA
Description:	No description for 2iykA was found.

Predicted Domain #3

Region A:
Residues: [331-1003]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKWRNYEVKL RLLLHLEELQ MEHDIRHYDL ESVPMTWDPV DQNPRLLTLE VPGVTESRPS  60
   61 VLRGDHLFAL LSSETHQEDP ITYKGFVHKV ELDRVKLSFS MSLLSRFVDG LTFKVNFTFN 120
  121 RQPLRVQHRA LELTGRWLLW PMLFPVAPRD VPLLPSDVKL KLYDRSLESN PEQLQAMRHI 180
  181 VTGTTRPAPY IIFGPPGTGK TVTLVEAIKQ VVKHLPKAHI LACAPSNSGA DLLCQRLRVH 240
  241 LPSSIYRLLA PSRDIRMVPE DIKPCCNWDA KKGEYVFPAK KKLQEYRVLI TTLITAGRLV 300
  301 SAQFPIDHFT HIFIDEAGHC MEPESLVAIA GLMEVKETGD PGGQLVLAGD PRQLGPVLRS 360
  361 PLTQKHGLGY SLLERLLTYN SLYKKGPDGY DPQFITKLLR NYRSHPTILD IPNQLYYEGE 420
  421 LQACADVVDR ERFCRWAGLP RQGFPIIFHG VMGKDEREGN SPSFFNPEEA ATVTSYLKLL 480
  481 LAPSSKKGKA RLSPRSVGVI SPYRKQVEKI RYCITKLDRE LRGLDDIKDL KVGSVEEFQG 540
  541 QERSVILIST VRSSQSFVQL DLDFNLGFLK NPKRFNVAVT RAKALLIIVG NPLLLGHDPD 600
  601 WKVFLEFCKE NGGYTGCPFP AKLDLQQGQN LLQGLSKLSP STSGPHSHDY LPQEREGEGG 660
  661 LSLQVEPEWR NEL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	90.0
Match:	2gjkA
Description:	No description for 2gjkA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits