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View Structure Prediction Details

Protein: ATP5F1
Organism: Homo sapiens
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP5F1.

Description E-value Query
Range		 Subject
Range
AT5F1_PONAB - ATP synthase F(0) complex subunit B1, mitochondrial OS=Pongo abelii GN=ATP5F1 PE=2 SV=1
AT5F1_PONPY - ATP synthase B chain, mitochondrial precursor - Pongo pygmaeus (Orangutan)
 8.0E-98 [1..256] [1..256]
AT5F1_BOVIN - ATP synthase F(0) complex subunit B1, mitochondrial OS=Bos taurus GN=ATP5F1 PE=1 SV=2
 2.0E-97 [1..256] [1..256]
sp|P24539-2|AT5F... - ATP synthase F(0) complex subunit B1, mitochondrial OS=Homo sapiens GN=ATP5F1 PE=1 SV=2 VAR_033534, ...
gi|55587708 - gi|55587708|ref|XP_513639.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex, sub...
 5.0E-96 [1..256] [1..256]
gi|62897597 - gi|62897597|dbj|BAD96738.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b isofo...
 9.0E-96 [1..256] [1..256]
gi|67970461 - gi|67970461|dbj|BAE01573.1| unnamed protein product [Macaca fascicularis]
gi|109013523, gi... - gi|109013526|ref|XP_001105607.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,...
 2.0E-94 [1..256] [1..256]
gi|73959885 - gi|73959885|ref|XP_537027.2| PREDICTED: similar to ATP synthase B chain, mitochondrial precursor [Ca...
 4.0E-94 [1..256] [1..256]
gi|74195489 - gi|74195489|dbj|BAE39561.1| unnamed protein product [Mus musculus]
 3.0E-93 [1..256] [1..256]
gi|148234340, gi... - gi|6911053|gb|AAF31360.1| ATP synthase subunit B [Xenopus laevis], gi|28981424|gb|AAH48772.1| MGC533...
 5.0E-93 [1..253] [1..249]

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Predicted Domain #1
Region A:
Residues: [1-256] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRVVLSAA ATAAPSLKNA AFLGPGVLQA TRTFHTGQPH LVPVPPLPEY GGKVRYGLIP  60
   61 EEFFQFLYPK TGVTGPYVLG TGLILYALSK EIYVISAETF TALSVLGVMV YGIKKYGPFV 120
  121 ADFADKLNEQ KLAQLEEAKQ ASIQHIQNAI DTEKSQQALV QKRHYLFDVQ RNNIAMALEV 180
  181 TYRERLYRVY KEVKNRLDYH ISVQNMMRRK EQEHMINWVE KHVVQSISTQ QEKETIAKCI 240
  241 ADLKLLAKKA QAQPVM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.045757
Match: 2clyA
Description: No description for 2clyA was found.

Predicted functions:

Term Confidence Notes
hydrogen ion transmembrane transporter activity 8.72510057985857 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 8.55000579659438 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 7.93389909959118 bayes_pls_golite062009
cation transmembrane transporter activity 3.61283616144649 bayes_pls_golite062009
ion transmembrane transporter activity 3.50519293233107 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.29516277085298 bayes_pls_golite062009
substrate-specific transporter activity 3.15545142940522 bayes_pls_golite062009
hydrogen-exporting ATPase activity, phosphorylative mechanism 1.0240589636709 bayes_pls_golite062009
binding 0.949032654488392 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 0.84815467800665 bayes_pls_golite062009
catalytic activity 0.67288476528593 bayes_pls_golite062009
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