| Protein: | CNOT3 |
| Organism: | Homo sapiens |
| Length: | 753 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNOT3.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-85 | [1..753] | [10..762] |
|
|
3.0E-82 | [1..753] | [1..751] |
|
|
4.0E-82 | [1..753] | [1..751] |
|
|
1.0E-78 | [1..753] | [1..752] |
|
|
8.0E-77 | [1..753] | [1..744] |
|
|
7.0E-64 | [1..753] | [1..728] |
|
|
4.0E-61 | [5..749] | [4..734] |
|
|
8.0E-61 | [1..752] | [1..683] |
|
Region A: Residues: [1-264] |
1 11 21 31 41 51
| | | | | |
1 MADKRKLQGE IDRCLKKVSE GVEQFEDIWQ KLHNAANANQ KEKYEADLKK EIKKLQRLRD 60
61 QIKTWVASNE IKDKRQLIDN RKLIETQMER FKVVERETKT KAYSKEGLGL AQKVDPAQKE 120
121 KEEVGQWLTN TIDTLNMQVD QFESEVESLS VQTRKKKGDK DKQDRIEGLK RHIEKHRYHV 180
181 RMLETILRML DNDSILVDAI RKIKDDVEYY VDSSQDPDFE ENEFLYDDLD LEDIPQALVA 240
241 TSPPSHSHME DEIFNQSSST PTST
|
| Detection Method: |  |
| Confidence: | 14.522879 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [265-450] |
1 11 21 31 41 51
| | | | | |
1 TSSSPIPPSP ANCTTENSED DKKRGRSTDS EVSQSPAKNG SKPVHSNQHP QSPAVPPTYP 60
61 SGPPPAASAL STTPGNNGVP APAAPPSALG PKASPAPSHN SGTPAPYAQA VAPPAPSGPS 120
121 TTQPRPPSVQ PSGGGGGGSG GGGSSSSSNS SAGGGAGKQN GATSYSSVVA DSPAEVALSS 180
181 SGGNNA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [451-587] |
1 11 21 31 41 51
| | | | | |
1 SSQALGPPSG PHNPPPSTSK EPSAAAPTGA GGVAPGSGNN SGGPSLLVPL PVNPPSSPTP 60
61 SFSDAKAAGA LLNGPPQFST APEIKAPEPL SSLKSMAERA AISSGIEDPV PTLHLTERDI 120
121 ILSSTSAPPA SAQPPLQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [588-753] |
1 11 21 31 41 51
| | | | | |
1 LSEVNIPLSL GVCPLGPVPL TKEQLYQQAM EEAAWHHMPH PSDSERIRQY LPRNPCPTPP 60
61 YHHQMPPPHS DTVEFYQRLS TETLFFIFYY LEGTKAQYLA AKALKKQSWR FHTKYMMWFQ 120
121 RHEEPKTITD EFEQGTYIYF DYEKWGQRKK EGFTFEYRYL EDRDLQ
|
| Detection Method: | |
| Confidence: | 35.79588 |
| Match: | PF04153.9 |
| Description: | No description for PF04153.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
