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View Structure Prediction Details

Protein: gi|222612898, gi...
Organism: Oryza sativa Japonica Group
Length: 808 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|222612898, gi....

Predicted Domain #1
Region A:
Residues: [1-808]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQGEPSSS ADPKGKKDYS TAILERKKSP NRLVVDEATN DDNSVVALHP DTMERLQLFR  60
   61 GDTVLLKGKK RKDTICIVLA DETCEEPKIR MNKVVRKNLR VRLGDVVSVH QCQDVKYGKR 120
  121 VHILPIDDTV EGITGNLFDA FLKPYFLEAY RPVRKGDLFL VRGGMRSVEF KVIETDPTEY 180
  181 CIVAPDTEIF CDGEPIKRED EERLDEVGYD DVGGVRKQMA QIRELVELPL RHPQLFKSIG 240
  241 VKPPKGILLY GPPGSGKTLI ARAVANETGA FFFLINGPEI MSKLAGESES NLRKAFEEAE 300
  301 KNAPSIIFID EIDSIAPKRE KTNGEVERRI VSQLLTLMDG LKARSHVIVM GATNRPNSID 360
  361 PALRRFGRFD REIDIGVPDE VGRLEVLRIH TKNMKLAEDV DLELIAKDTH GYVGADLAAL 420
  421 CTEAALQCIR EKMDIIDLED ETIDAEILNS MAVTNDHFKT ALGTSNPSAL RETVVEVPNV 480
  481 SWEDIGGLEN VKRELQETVQ YPVEHPEKFE KFGMSPSKGV LFYGPPGCGK TLLAKAIANE 540
  541 CQANFISVKG PELLTMWFGE SEANVREIFD KARQSAPCVL FFDELDSIAT QRGSSVGDAG 600
  601 GAADRVLNQL LTEMDGMNAK KTVFIIGATN RPDIIDPALL RPGRLDQLIY IPLPDEQSRL 660
  661 QIFKACLRKS PVAKDVDLNA LAKYTQGFSG ADITEICQRA CKYAIRENIE KDIERERRSK 720
  721 ENPEAMEEDE VDDIAEIKAA HFEESMKYAR RSVSDADIRK YQAFAQTLQQ SRGFGSEFRF 780
  781 ERTEAGAGAA ADPFASAAAV ADDDDLYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle