| Protein: | gi|110288962 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 411 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110288962.
| Description | E-value | Query Range |
Subject Range |
|
|
454.0 | [0..2] | [409..896] |
|
Region A: Residues: [1-411] |
1 11 21 31 41 51
| | | | | |
1 MVWKANGKWR MCVDFTDLNK ACPKDHFPLP RIDQLVDSTA GCELLSFLDA YSGYHQISMA 60
61 KEDEEKTALI TPFGETLSSA RSKVHLATNS ENNVEAYVDD IVVKTKTSDS LIDDLRETFD 120
121 NLRRYRLMLN PEKCTFGVSS GKLLGFLVSG RGIEANPNKI KAIENMKSPT RLKELRHYFE 180
181 AHRVTVVSSF PLGEVVRNKD VVGRIAKWVV ELSQFDVRFV PRTAIKSQVL ADFVADWTMP 240
241 DNRSDNQVDN ETWTMAFDGA LNNQGAGAGF ILTSPSGDQF KHAIHLNFRA TNNTAEYEGL 300
301 LAGIKAAAAL GVRRLIVKGD SELVANQVHK DYKCSSPELS KYLAEVRKLE KMFNGIEVRH 360
361 VYRKGNIEPD DLVRRASRRE PLEPGTFLDV LTRPSVKEAS GEDSPVAPNI S
|
| Detection Method: |  |
| Confidence: | 93.522879 |
| Match: | 1lweA |
| Description: | HIV RNase H (Domain of reverse transcriptase); HIV-1 reverse transcriptase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.518931870161593 | bayes_pls_golite062009 |
| transferase activity | 0.35636561630516 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.32441153240842 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.29860211454192 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.0603497936698201 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.0602875211585996 | bayes_pls_golite062009 |
