YRC Public Data Repository - Protein Structure Prediction

Protein:	TATDN1
Organism:	Homo sapiens
Length:	297 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TATDN1.

Description	E-value	Query Range	Subject Range
TATD1_MOUSE - Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=1 SV=1	2.0E-95	[1..294]	[1..294]
gi\|40787792 - gi\|40787792\|gb\|AAH64964.1\| TatD DNase domain containing 1 [Homo sapiens]	2.0E-94	[1..297]	[1..297]
gi\|57095336 - gi\|57095336\|ref\|XP_532325.1\| PREDICTED: similar to TatD DNase domain containing 1 [Canis familiaris]	3.0E-94	[1..294]	[1..294]
gi\|109087416 - gi\|109087416\|ref\|XP_001101992.1\| PREDICTED: similar to TatD DNase domain containing 1 isoform 2 [Mac...	4.0E-94	[1..297]	[1..297]
TATD1_BOVIN - Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1 PE=2 SV=1	1.0E-93	[1..295]	[1..295]
TATD1_XENLA - Putative deoxyribonuclease TATDN1 OS=Xenopus laevis GN=tatdn1 PE=2 SV=1	5.0E-90	[1..295]	[1..295]
gi\|114621645 - gi\|114621645\|ref\|XP_519947.2\| PREDICTED: TatD DNase domain containing 1 [Pan troglodytes]	1.0E-88	[1..297]	[1..333]
TATD1_DANRE - Putative deoxyribonuclease TATDN1 OS=Danio rerio GN=tatdn1 PE=2 SV=1	3.0E-85	[1..294]	[1..294]
gi\|108868492, gi... - gi\|157108913\|ref\|XP_001650441.1\| hypothetical protein AaeL_AAEL015062 [Aedes aegypti], gi\|108868492\|...	1.0E-82	[2..295]	[11..307]

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Predicted Domain #1

Region A:
Residues: [1-297]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFKFIDIG INLTDPMFRG IYRGVQKHQD DLQDVIGRAV EIGVKKFMIT GGNLQDSKDA  60
   61 LHLAQTNGMF FSTVGCHPTR CGEFEKNNPD LYLKELLNLA ENNKGKVVAI GECGLDFDRL 120
  121 QFCPKDTQLK YFEKQFELSE QTKLPMFLHC RNSHAEFLDI MKRNRDRCVG GVVHSFDGTK 180
  181 EAAAALIDLD LYIGFNGCSL KTEANLEVLK SIPSEKLMIE TDAPWCGVKS THAGSKYIRT 240
  241 AFPTKKKWES GHCLKDRNEP CHIIQILEIM SAVRDEDPLE LANTLYNNTI KVFFPGI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	75.522879
Match:	2gzxA
Description:	No description for 2gzxA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits