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View Structure Prediction Details

Protein: CACNG6
Organism: Homo sapiens
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CACNG6.

Description E-value Query
Range
Subject
Range
CCG6_RAT - Voltage-dependent calcium channel gamma-6 subunit OS=Rattus norvegicus GN=Cacng6 PE=2 SV=1
8.0E-69 [1..256] [1..256]
CCG6_MOUSE - Voltage-dependent calcium channel gamma-6 subunit OS=Mus musculus GN=Cacng6 PE=2 SV=1
1.0E-66 [1..256] [1..256]
gi|114678977 - gi|114678977|ref|XP_001174737.1| PREDICTED: voltage-dependent calcium channel gamma-6 subunit isofor...
3.0E-66 [1..260] [1..260]
gi|194675466, gi... - gi|76642423|ref|XP_599883.2| PREDICTED: similar to Voltage-dependent calcium channel gamma-6 subunit...
1.0E-61 [1..259] [2..260]
gi|73947617 - gi|73947617|ref|XP_541431.2| PREDICTED: similar to Voltage-dependent calcium channel gamma-6 subunit...
1.0E-61 [1..260] [1..259]
CCG1_RABIT - Voltage-dependent calcium channel gamma-1 subunit OS=Oryctolagus cuniculus GN=CACNG1 PE=1 SV=1
3.0E-57 [31..250] [1..214]
CCG1_PIG - Voltage-dependent calcium channel gamma-1 subunit OS=Sus scrofa GN=CACNG1 PE=2 SV=1
1.0E-56 [31..250] [1..216]
gi|45383846, gi|... - gi|45383846|ref|NP_989463.1| calcium channel, voltage-dependent, gamma subunit 4 [Gallus gallus], gi...
4.0E-54 [31..255] [2..220]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMWSNFFLQE ENRRRGAAGR RRAHGQGRSG LTPEREGKVK LALLLAAVGA TLAVLSVGTE  60
   61 FWVELNTYKA NGSAVCEAAH LGLWKACTKR LWQADVPVDR DTCGPAELPG EANC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TYFKFFTTGE NARIFQRTTK KEVNLAAAVI AVLGLAVMAL GCLCIIMVLS KGAEFLLRVG  60
   61 AVCFGLSGLL LLVSLEVFRH SVRALLQRVS PEPPPAPRLT YEYSWSLGCG VGAGLILLLG 120
  121 AGCFLLLTLP SWPWGSLCPK RGHRAT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle