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View Structure Prediction Details

Protein: C3H63_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C3H63_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|115485469, gi... - gi|115485469|ref|NP_001067878.1| Os11g0472000 [Oryza sativa (japonica cultivar-group)], gi|113645100...
203.0 [0..37] [444..7]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAPSAGGV GEGSSSSAAA AAAAAAATIG PHVVDEEAMW QMNLGEAMEA GPYPERIGEP  60
   61 DCSYYMRTGL CRFGMTCKFN HPADRKMAVA AARMKGEYPQ RIGQPECQYY LKTGTCKFGA 120
  121 TCKFHHPREK AAIATRVQLN ALGYPLRPNE KECAYYLR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 2d9nA
Description: No description for 2d9nA was found.

Predicted Domain #2
Region A:
Residues: [159-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGQCKFGSTC KFHHPQPSNT MVAVRGSVYS PGQSVTSPSQ HTYPGAVTNW PLSRSASFIA  60
   61 SPRWPGHSSY AQVIVPPGLV QVPGWNPYAA QIGSSSSDDQ QRTAGGAQYY TGSRHSETPN 120
  121 MGDQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1pk8A
Description: Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [283-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMFSSYQAGS VPLGLYTVQR ESIFPERPDQ PECQFYMKTG DCKFGAVCKF HHPKERIIPT  60
   61 PNCALSSLGL PLRPGEPICT FYSRYGICKF GPNCKFDHPM GTVMYGLATS PTGDVSARRM 120
  121 LAPVPAHSEV SPDNVSGRSR RITHSDSQQI PSGERGTERE AS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.045757
Match: 2cqeA
Description: Solution Structure of the Zinc-finger domain in KIAA1064 protein
Matching Structure (courtesy of the PDB):

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