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View Structure Prediction Details

Protein: gi|222626184, gi...
Organism: Oryza sativa Japonica Group
Length: 613 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222626184, gi....

Description E-value Query
Range
Subject
Range
gi|50920131, gi|... - gi|50920131|ref|XP_470426.1| putative AFG1-like ATPase [Oryza sativa (japonica cultivar-group)], gi|...
523.0 [0..56] [613..183]

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Predicted Domain #1
Region A:
Residues: [1-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPRLHRAIA RRSLLTSTAL LPAVARHRDA PLPSAPGLPR LLHHAPGASD QARKSGPLTL  60
   61 YRDLVSQGKL QHDIYQENVA TQLDNLLRRL EQYEMEMEDY HARLSMWENT REKQRRRLLV 120
  121 QEAEDKQRDG VWIDEKRGFL DKLVSRKRRG NIEPGVGKWV SYLNREKKLD TLVGQKPVAP 180
  181 IAPKGIYLYG NVGSGKTMLM DMFYGATEGL IKHRRRFHFH EAMLEIHDHM HDVWKRRDED 240
  241 KSIESSAFSW ISSLPFDGKI KEWLIGEEKY KQNTQQNHI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.09691
Match: 2qgzA
Description: No description for 2qgzA was found.

Predicted Domain #2
Region A:
Residues: [280-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLAVADKFLV DRQANKSGAS ILCFDEIQTI DVFAVVALSG ILSRLLSTGT VLVSTSNKAP  60
   61 EDLNQDGMQR EIFLDLLSKL DENCNKILVG TETDYRRLIP TDGLTQIHYF WPLTSDIRSM 120
  121 YEAMWHDITR QTGGNIISVT IPVMFGRYLE IPKSCNGVAR FDFEYLCGRP V

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.08
Match: 2qgzA
Description: No description for 2qgzA was found.

Predicted Domain #3
Region A:
Residues: [451-613]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAADYIAIAR NYHTIFISDI PAMSMKIRDK ARRFITLIDE LYNHHCRLVC LAASSIDDLF  60
   61 QGTDEGPLFD LESFQFEGEA EGAKLRRDVL AEGNVGAAPS PTGLVAILSG QEEMFAFRRA 120
  121 ISRLIEMQTS LYLERVERVH SSLQQQSSVL TKSSTVSQSA PSV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle