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View Structure Prediction Details

Protein: gi|108711861
Organism: Oryza sativa Japonica Group
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108711861.

Description E-value Query
Range
Subject
Range
gi|108711862, gi... - gi|50919534|ref|XP_470154.1| unknown protein [Oryza sativa], gi|18855050|gb|AAL79742.1|AC096687_6 pu...
344.0 [0..1] [216..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLMAGWNS PVLGDEKKVR LMRNRSLTRE EVDAFWRRQQ RKQPPSSSTS SEPNATTSPL  60
   61 ASPRAAANVV SPLASPRAAG DISPLAASP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRAQEMSSSR CTLALRRLER MNSMPSPLAR TVMTRADDHP YQSYSHSEPP SPAAPHAGDH  60
   61 RHQRSSFAAD HDDDDDDVAS TSSECWWTRS SWAFLNETPS PEQQMFGKSQ TYACVQFHVS 120
  121 RVVTGNA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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