YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|108710960
Organism: Oryza sativa Japonica Group
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108710960.

Description E-value Query
Range
Subject
Range
IMDH_STAES - Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=guaB PE=...
IMDH_STAEQ - Inosine-5'-monophosphate dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=...
IMDH_STAEP - (Q8CMQ7) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD)
gi|251805157, gi... - gi|251811290|ref|ZP_04825763.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis BCM...
187.0 [0..2] [225..6]

Back

Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMVCGSVLHP DFQSSSQAHD FVGVKMQRAI QAIGSHGSLL KSAVLRHISA PKPSILPAVY  60
   61 SRSMSVSSAQ IEESGFETAT VADILKSKGK SADGSWLWCT TDDSVYDAVK SMTQHNVGAL 120
  121 VVVKPGQDKS IAGIVTERDY LRKIIVQGRS SKSTKVGDIM TEENQLITVK PDTRVLQAMQ 180
  181 LMTEKRIRHI PVIDGTGMVG MVSIGDIVRA VVSEHREELN RLNAYIQGGY 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.221849
Match: 1vrdA
Description: Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle