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View Structure Prediction Details

Protein: gi|222625009, gi...
Organism: Oryza sativa Japonica Group
Length: 604 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222625009, gi....

Description E-value Query
Range
Subject
Range
gi|50920715, gi|... - gi|50920715|ref|XP_470718.1| unknown protein [Oryza sativa], gi|18921313|gb|AAL82518.1|AC084766_4 un...
760.0 [0..13] [593..13]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASPPPRSP SSGDPAEAAD LAASAAAALA SPARVWSSLL ARLPSLSDYS RLLSVGRGRG  60
   61 RRRRRAALPL PIRPAAAHSA RIAGQMPKAF DILQDVAQHT LSNLHDIQKS LIFWQSKAEG 120
  121 TSSQKLYFMI FERGPRAFVE AAWQTLTRLK SNGSPVPHLL HSASDMVSTK LAVLTSMQHC 180
  181 LAAFLAEVYF EVDKCRKGLT ESSDKSLHTL FIVLNSVFSK LEVSFRNAVE GQTLLCTHDG 240
  241 KSPELIFERL PEVDVESSE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [260-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WTEVLSANAI TLIYQNLQKF DDFISDQFSN HKRPRNTTIY WLPYTCGALG LSACSLWLLR  60
   61 HSSLMGSSDI DNWIQDAKES MVGFWDVHVG QPIISIRDEL FETFKQRSKH EMEKQEVQQT 120
  121 EESLRRMLLD FCGNTSNEKP PQDMSELAMM EIVMKRYEKE AMHPFKGLSS GKLTCALSIQ 180
  181 IEKHKLALLE AMLELDQILR ANEINFAILA ALPAFGVSLL LLFAVRAWAT HGRGAE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [496-604]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRGRTARRQR RLLLADVEKR LMEFQNCMAN GMEEEACCKF GLTLYTLDRL YKAVESQARE  60
   61 TGEWSSLRED MFDLAKPGVG MEDKLVLLSR LKGMYDCLLP SPSGVLPRL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle