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View Structure Prediction Details

Protein: gi|108708133, gi...
Organism: Oryza sativa Japonica Group
Length: 568 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108708133, gi....

Description E-value Query
Range
Subject
Range
gi|125543859 - gi|125543859|gb|EAY89998.1| hypothetical protein OsI_11565 [Oryza sativa Indica Group]
gi|108708132, gi... - gi|215704653|dbj|BAG94281.1| unnamed protein product [Oryza sativa Japonica Group], gi|108708132|gb|...
580.0 [0..1] [568..1]

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Predicted Domain #1
Region A:
Residues: [1-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLFETPAG FALFKVLDEG KLDKVEDLWK EFTTSDSARK VVELKAFNKF ENTSDALSAA  60
   61 TLIIDSKPTK GLRKFLQKHC EGETLAVADS KLGNAIKEKL KIDCLHNSAV MELMRGLRNQ 120
  121 LTELISGLGA QDLGPMSLGL SHSLSRYKLK FSPEKVDTMI IQAIGLLDDL DKELNTYAMR 180
  181 VREWYGWHFP ELTKIVADNI QYAKVVKMMG DRTNAESLDF SEILSDDEVE AQLKEAAVIS 240
  241 MGTEVSELDL LNIRELCDQV LALSEYRAQL FDYLRSRMNT IAPNLTALVG ELVGARLIAH 300
  301 GGSLVNLAKQ PGSTIQILGA EKALFRALKT KHATPKYGLI YHASLIGQAA PKHKGKISRS 360
  361 LAAKTALAIR YDALGDGEDN SIGLESRVKL ETRLR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.154902
Match: 2nnwA
Description: No description for 2nnwA was found.

Predicted Domain #2
Region A:
Residues: [396-568]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VLEGKELGRS AGSTKGKPKI EVYEKDRKKG AGALITPAKT YNPAADLVLG QSTEETPKKP  60
   61 EGASKKRKHQ ETEPAPAEKT TKEDGDQEGE KKKKKKKSKE SEESPAADAD GGKKKKKTSK 120
  121 ESEEPPVATT EGEKKEKKKK KKSDSQDAED VAMETEESGK KEKKKKKKHH SDE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.61
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle