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View Structure Prediction Details

Protein: gi|108707573
Organism: Oryza sativa Japonica Group
Length: 755 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108707573.

Description E-value Query
Range
Subject
Range
gi|34897354, gi|... - gi|34897354|ref|NP_910023.1| hypothetical protein [Oryza sativa], gi|15042816|gb|AAK82439.1|AC091247...
583.0 [0..1] [755..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQISLGHRY KECRPRRNNS PTKILVGKDL LKELEHRRSS PSVIAKLMGI DVLPPAYVTH  60
   61 NRHQDFKDVF EVSEEPQEAI VKERSHHFPK GLPSLKRSAL KLKKLMPSMS PYGDGPFDNN 120
  121 VVCRDGFDRL NSLEINNPLF EK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPHDMNYSAK HQYEKETSST FRKYPAGLGN TSLKDIRNSS RGKLEDFNSI VVLEPGLGKV  60
   61 QESGKAFCTP DPSHINKNFR REMQQADFSL QNRGRVSPNL LDTEDVDVSR IKRERYLSRN 120
  121 AVDSLLEGKE SSFDHHNVPD TSSSGSSQNC VSGEVNSRQS NRPSSNSSPR KNRQKYEEGS 180
  181 VGSKTLAEMF ALSDSERLKR DSDSHAQIRH NKLNRGNSNG K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [364-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGCFIVLPKH APRLHPHSSL DKNSPHSNFI PNTSNTYHSG QSHFNSFCDI SRLQQIGSPS  60
   61 QDNLRNACAK HQTLRQHRSA SPSHDNRNHS RCSTDNFSTF DCINEKILFT TDEDLVKKPA 120
  121 ETVHSSFESC GEEKVSASPF NCRDYESITV SDHSYVAKSH KSLKEVGQPS PVSILEPPTD 180
  181 EDSCCSGYFK CNLQDMPNVE KLIDDCELRY EQVSLSSDDD SGSSYRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [591-755]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEAFQVEEER GFSYLLDMLI NSGMIVADSQ LLCKSWHSPG CPVGPQVFDR LERKYNKISA  60
   61 WPRPERRLLF DLANTVLSEI LAPWKSSRRC CPVWGPEGPV EVVWQTMVRR QEELAVGHPD 120
  121 DKVLDPEWLE VGEDINTVGK QIAKMLHGDL LDEIILEFLS GCVAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle