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View Structure Prediction Details

Protein: gi|215687246, gi...
Organism: Oryza sativa Japonica Group
Length: 232 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215687246, gi....

Description E-value Query
Range
Subject
Range
gi|73978732 - gi|73978732|ref|XP_532740.2| PREDICTED: similar to chloride channel, nucleotide-sensitive, 1A [Canis...
238.0 [0..17] [225..70]

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Predicted Domain #1
Region A:
Residues: [1-232]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPGLQRFTD IAGDGGPRLD AASGEELLRM DRAASVALGR RAPEPPGTLF VTTRRVIWLS  60
   61 ETEKGQGYAV DFLAITLHAV SRDLEAYPSP CIYTQIDAED GSDEEAGGSD FEANGDLQLA 120
  121 KVSEMRIILS DPGQLDALFD VFCHCAELNP DPNAVRNEEN GWSGGENMAE GGWIHGDEDM 180
  181 IDGNDLEAHM FFTNLIGQNG LHDLGRSVRE LQIDDQRFED AEEEDEIQEN GH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.09691
Match: 1zyiA
Description: Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle