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View Structure Prediction Details

Protein: gi|215706972, gi...
Organism: Oryza sativa Japonica Group
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215706972, gi....

Description E-value Query
Range
Subject
Range
gi|56236062, gi|... - gi|79375455|ref|NP_176975.2| iron ion binding / oxidoreductase, acting on paired donors, with incorp...
242.0 [0..16] [307..5]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAAASPPP PAAAGEHLRF HLRGFLSPET CKELEFVHRS CGTAGYRPSV VSTSLPHLAA  60
   61 TGCGHLLLPF VPVRERLRDA VESAFSCHFD LFIEFTGLIS WCKGASIGWH SDDNKPYLRQ 120
  121 RAFTAVCYLN DHGKDYKGGI LQFQDGEPSF ITPVAGDVVI YTADNSNTHC VDEVTEGERL 180
  181 TLTLWFTRDS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2g19A
Description: No description for 2g19A was found.

Predicted Domain #2
Region A:
Residues: [191-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AYDEDPKLLS FLSQTSLNYE PVHQSSYIPL PASDIMYWFA YDHSGFDVRC ARVHILGFSF  60
   61 HSSIDEDNKS VAPAEDDPIE LLGKPVRLGR GDDVFDKVFA NGLHALQVST YFHFLSSFSL 120
  121 QIMSIRLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle