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View Structure Prediction Details

Protein: U496A_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for U496A_ORYSJ.

Description E-value Query
Range
Subject
Range
U496H_ARATH - UPF0496 protein At5g66675 OS=Arabidopsis thaliana GN=At5g66675 PE=2 SV=1
396.0 [0..3] [388..15]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNSSSSGSH RPPRPASSES ALPPAAAAAE ELSSYEAACR SDPELRTFDT TLQRRTSRAI  60
   61 STLAVGVEVR SLSLESLREV TGCLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DMNQEVVRVI LDCKKDIWKS PELFDLVEDY FESSLHTLDF CTALDKCLKR ARDSQLLLHV  60
   61 ALQRFDDEED NDAAAAGQED AAPSARYART LHELRQFKAA GDP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [189-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FTEEFFSAFQ AVYRQQLTML EKLQQRKHRL DKKVRAIKAW RRVSSIIFAT TFAAVLICSV  60
   61 VAAAIAAPPV AAALAAAASI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [269-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVGSMGKWID SLLKGYQDAL RGQKEVVSAM QVGTFIAIKD LDSIRVLINR VELEISSMID  60
   61 CVEFAERDEE AVKFGVEEIK KKLEVFMKSV EDLGEQADRC SRDIRRARTV VLQRIIRHPS 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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