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View Structure Prediction Details

Protein: gi|215704352, gi...
Organism: Oryza sativa Japonica Group
Length: 809 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|215704352, gi....

Predicted Domain #1
Region A:
Residues: [1-809]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQGEPSSS SDPKGKKDFS TAILERKKSP NRLVVDEATN DDNSVIGMHP DTMEKLQLFR  60
   61 GDTVLLKGKK RKDTICIVLA DDTCEEPKIR MNKVVRKNLR VRLGDVVSVH QCPDVKYGKR 120
  121 VHILPIDDTV EGITGNLFDA FLKPYFLEAY RPLRKGDLFL VRGGMRSVEF KVIETDPAEY 180
  181 CIVAPDTEIF CDGEPIKRED EERLDEVGYD DVGGVRKQMA QIRELVELPL RHPQLFKSIG 240
  241 VKPPKGILLY GPPGSGKTLI ARAVANETGA FFFLINGPEI MSKLAGESES NLRKAFEEAE 300
  301 KNAPSIIFID EIDSIAPKRE KTHGEVERRI VSQLLTLMDG LKARSHVIVM GATNRPNSID 360
  361 PALRRFGRFD REIDIGVPDE VGRLEVLRIH TKNMKLAEDV DLEHIAKDTH GYVGADLAAL 420
  421 CTEAALQCIR EKMDIIDLED ETIDAEILNS MAVTNDHFKT ALGTSNPSAL RETVVEVPNV 480
  481 SWEDIGGLEN VKRELQETVQ YPVEHPEKFE KFGMSPSKGV LFYGPPGCGK TLLAKAIANE 540
  541 CQANFISVKG PELLTMWFGE SEANVREIFD KARQSAPCVL FFDELDSIAT QRGSSVGDAG 600
  601 GAADRVLNQL LTEMDGMNAK KTVFIIGATN RPDIIDPALL RPGRLDQLIY IPLPDDQSRL 660
  661 QIFKACLRKS PVAKDVDLNA LAKYTQGFSG ADITEICQRA CKYAIRENIE KDIEMEKRRK 720
  721 DNPEAMEEDE VDDIAEIKAA HFEESMKYAR RSVSDADIRK YQAFAQTLQQ SRGFGTEFRF 780
  781 ADQPASGAGA AADPFASAAA AADDDDLYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle