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View Structure Prediction Details

Protein: gi|108706066, gi...
Organism: Oryza sativa Japonica Group
Length: 986 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|108706066, gi....

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLTSALLS RSSSTRIPAA AAAAAAISNP AGAAASSSSP SPPPPSSRPR PASPFASGLA  60
   61 GRIFGGRRAA ARSSSSAAAV FERRFASAAA K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 121.0
Match: 1l5jA
Description: Aconitase B, N-terminal domain; Aconitase B, second N-terminal domain; Aconitase B, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [92-986]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSYDEILTGL AKPGGGAEFG KYYSLPALSD PRIERLPYSI RILLESAIRN CDEFQVTGKD  60
   61 VEKILDWENS APKQVEIPFK PARVLLQDFT GVPAVVDLAC MRDAMSKLGS DPNKINPLVP 120
  121 VDLVIDHSVQ VDVARSENAV QANMELEFHR NKERFGFLKW GSTAFRNMLV VPPGSGIVHQ 180
  181 VNLEYLARVV FNNGGILYPD SVVGTDSHTT MIDGLGVAGW GVGGIEAEAT MLGQPMSMVL 240
  241 PGVVGFKLTG KLRNGVTATD LVLTVTQMLR KHGVVGKFVE FYGGGMSELS LADRATIANM 300
  301 SPEYGATMGF FPVDGKTLDY LKLTGRSDDT VAMIESYLRA NKMFVDYNQP EAERVYSSYL 360
  361 ELNLEEVEPC LSGPKRPHDR VTLKNMKSDW LSCLDNDVGF KGFAVPKESQ GKVAEFSFHG 420
  421 TPAKLKHGDV VIAAITSCTN TSNPNVMLGA ALVAKKACEL GLEVKPWIKT SLAPGSGVVK 480
  481 KYLDKSGLQK YLDQLGFHIV GYGCTTCIGN SGELDETVSA AISDNDIVAA AVLSGNRNFE 540
  541 GRVHALTRAN YLASPPLVVA YALAGTVNID FEKEPIGISK DGKEVYFRDI WPSTEEIAEV 600
  601 VKSSVLPDMF KSTYEAITKG NPMWNELSVS ASTLYPWDPT STYIHEPPYF KDMTMSPPGP 660
  661 RPVKDAYCLL NFGDSITTDH ISPAGSIHPD SPAARYLKER GVERKDFNSY GSRRGNDEIM 720
  721 ARGTFANIRL VNKFLKGEVG PKTIHIPSGE KLSVFDAATK YKNEGHDTII LAGAEYGSGS 780
  781 SRDWAAKGPM LQGVKAVIAK SFERIHRSNL AGMGIIPLCF KSGEDADTLG LTGHERFTVH 840
  841 LPANVSEIKP GQDVTVTTDN GKSFTCTLRF DTEVELAYYD NGGILPYVIR KIAEQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2b3xA
Description: Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle