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View Structure Prediction Details

Protein: gi|222624108, gi...
Organism: Oryza sativa Japonica Group
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222624108, gi....

Description E-value Query
Range
Subject
Range
gi|218184940 - gi|218184940|gb|EEC67367.1| hypothetical protein OsI_34472 [Oryza sativa Indica Group]
gi|21717150, gi|... - gi|37536444|ref|NP_922524.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|31433273|g...
350.0 [0..4] [336..10]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQLISTAD HDTLPGNYVR PEAQRPRLAD VLSDASIPVV DLANPDRAKL VSQVGAACRS  60
   61 HGFFQVLNHG VPVELTLSVL AVAHDFFRLP AEEKAKLYSD DPAKKIRLST SFNVRKETVH 120
  121 NWRDYLRLHC YPLHRYLPDW PSNPPSFREI ISTYCKEVRE LGFRLYGAIS ESLGLEQDYI 180
  181 KKVLGEQEQH MAVNFYPKCP EPELTFGLPA HTDPNALTIL LMDQQVAGLQ VLKEGRWIAV 240
  241 NPQPNALVIN IGDQLQALSN GRYKSVWHRA VVNSDKARMS VASFLCPCND VLIGPAQKLI 300
  301 TDGSPAVYRN YTYDEYYKKF WSRNLDQEHC LELFRTTPTD TS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.69897
Match: 2brtA
Description: No description for 2brtA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.588242505102319 bayes_pls_golite062009
nucleic acid binding 0.0678642854814351 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle