| Protein: | gi|85567007, gi|... |
| Organism: | Homo sapiens |
| Length: | 1064 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|85567007, gi|....
| Description | E-value | Query Range |
Subject Range |
|
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871.0 | [0..1] | [1064..1] |
|
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870.0 | [0..1] | [1064..1] |
|
|
869.0 | [0..1] | [1064..1] |
|
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860.0 | [0..1] | [1064..1] |
|
|
845.0 | [0..1] | [1064..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MNHDFQALAL ESRGMGELLP TKKFWEPDDS TKDGQKGIFL GDDEWRETAW GASHHSMSQP 60
61 IMVQRRSGQG FHGNSEVNAI LSPRSESGGL GVSMVEYVLS SSPADKLDSR FRKGNFGTRD 120
121 AETDGPEKGD QKGKASPFEE DQNRDLKQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.219 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [149-351] |
1 11 21 31 41 51
| | | | | |
1 GDDDDSKING RGLPNGMDAD CKDFNRTPGS RQASPTEVVE RLGPNTNPSE GLGPLPNPTA 60
61 NKPLVEEFSN PETQNLDAME QVGLESLQFD YPGNQVPMDS SGATVGLFDY NSQQQLFQRT 120
121 NALTVQQLTA AQQQQYALAA AQQPHIAGVF SAGLAPAAFV PNPYIISAAP PGTDPYTAAG 180
181 LAAAATLAGP AVVPPQYYGV PWG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [352-582] |
1 11 21 31 41 51
| | | | | |
1 VYPANLFQQQ AAAAANNTAS QQAASQAQPG QQQVLRAGAG QRPLTPNQGQ QGQQAESLAA 60
61 AAAANPTLAF GQGLATGMPG YQVLAPTAYY DQTGALVVGP GARTGLGAPV RLMAPTPVLI 120
121 SSAAAQAAAA AAAGGTASSL TGSTNGLFRP IGTQPPQQQQ QQPSTNLQSN SFYGSSSLTN 180
181 SSQSSSLFSH GPGQPGSTSL GFGSGNSLGA AIGSALSGFG SSVGSSASSS A
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [583-720] |
1 11 21 31 41 51
| | | | | |
1 TRRESLSTSS DLYKRSSSSL APIGQPFYNS LGFSSSPSPI GMPLPSQTPG HSLTPPPSLS 60
61 SHGSSSSLHL GGLTNGSGRY ISAAPGAEAK YRSASSTSSL FSSSSQLFPP SRLRYNRSDI 120
121 MPSGRSRLLE DFRNNRFP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [721-1064] |
1 11 21 31 41 51
| | | | | |
1 NLQLRDLIGH IVEFSQDQHG SRFIQQKLER ATPAERQMVF NEILQAAYQL MTDVFGNYVI 60
61 QKFFEFGSLD QKLALATRIR GHVLPLALQM YGCRVIQKAL ESISSDQQSE MVKELDGHVL 120
121 KCVKDQNGNH VVQKCIECVQ PQSLQFIIDA FKGQVFVLST HPYGCRVIQR ILEHCTAEQT 180
181 LPILEELHQH TEQLVQDQYG NYVIQHVLEH GRPEDKSKIV SEIRGKVLAL SQHKFASNVV 240
241 EKCVTHASRA ERALLIDEVC CQNDGPHSAL YTMMKDQYAN YVVQKMIDMA EPAQRKIIMH 300
301 KIRPHITTLR KYTYGKHILA KLEKYYLKNS PDLGPIGGPP NGML
|
| Detection Method: | |
| Confidence: | 155.0 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
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