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View Structure Prediction Details

Protein: ACTN4
Organism: Homo sapiens
Length: 911 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACTN4.

Description E-value Query
Range
Subject
Range
ACTN1_RAT - Alpha-actinin-1 OS=Rattus norvegicus GN=Actn1 PE=1 SV=1
1.0E-80 [24..911] [5..892]
gi|73963351 - gi|73963351|ref|XP_866940.1| PREDICTED: similar to actinin, alpha 1 isoform 7 [Canis familiaris]
1.0E-80 [24..911] [5..923]
ACTN1_MACFA - Alpha-actinin-1 OS=Macaca fascicularis GN=ACTN1 PE=2 SV=1
2.0E-80 [24..911] [5..892]
ACTN1_BOVIN - Alpha-actinin-1 OS=Bos taurus GN=ACTN1 PE=2 SV=1
2.0E-80 [24..911] [5..892]
gi|625303, gi|28334 - pir||FAHUAA alpha-actinin 1 - human, gi|28334|emb|CAA33803.1| unnamed protein product [Homo sapiens]
3.0E-80 [24..911] [5..892]
gi|30585329, gi|... - gi|61373054|gb|AAX43966.1| actinin alpha 1 [synthetic construct], gi|61373051|gb|AAX43965.1| actinin...
6.0E-80 [24..911] [5..892]

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Predicted Domain #1
Region A:
Residues: [1-911]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDYHAANQS YQYGPSSAGN GAGGGGSMGD YMAQEDDWDR DLLLDPAWEK QQRKTFTAWC  60
   61 NSHLRKAGTQ IENIDEDFRD GLKLMLLLEV ISGERLPKPE RGKMRVHKIN NVNKALDFIA 120
  121 SKGVKLVSIG AEEIVDGNAK MTLGMIWTII LRFAIQDISV EETSAKEGLL LWCQRKTAPY 180
  181 KNVNVQNFHI SWKDGLAFNA LIHRHRPELI EYDKLRKDDP VTNLNNAFEV AEKYLDIPKM 240
  241 LDAEDIVNTA RPDEKAIMTY VSSFYHAFSG AQKAETAANR ICKVLAVNQE NEHLMEDYEK 300
  301 LASDLLEWIR RTIPWLEDRV PQKTIQEMQQ KLEDFRDYRR VHKPPKVQEK CQLEINFNTL 360
  361 QTKLRLSNRP AFMPSEGKMV SDINNGWQHL EQAEKGYEEW LLNEIRRLER LDHLAEKFRQ 420
  421 KASIHEAWTD GKEAMLKHRD YETATLSDIK ALIRKHEAFE SDLAAHQDRV EQIAAIAQEL 480
  481 NELDYYDSHN VNTRCQKICD QWDALGSLTH SRREALEKTE KQLEAIDQLH LEYAKRAAPF 540
  541 NNWMESAMED LQDMFIVHTI EEIEGLISAH DQFKSTLPDA DREREAILAI HKEAQRIAES 600
  601 NHIKLSGSNP YTTVTPQIIN SKWEKVQQLV PKRDHALLEE QSKQQSNEHL RRQFASQANV 660
  661 VGPWIQTKME EIGRISIEMN GTLEDQLSHL KQYERSIVDY KPNLDLLEQQ HQLIQEALIF 720
  721 DNKHTNYTME HIRVGWEQLL TTIARTINEV ENQILTRDAK GISQEQMQEF RASFNHFDKD 780
  781 HGGALGPEEF KACLISLGYD VENDRQGEAE FNRIMSLVDP NHSGLVTFQA FIDFMSRETT 840
  841 DTDTADQVIA SFKVLAGDKN FITAEELRRE LPPDQAEYCI ARMAPYQGPD AVPGALDYKS 900
  901 FSTALYGESD L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.69897
Match: 1sjjA
Description: Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle