| Protein: | LSM14B |
| Organism: | Homo sapiens |
| Length: | 385 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LSM14B.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-67 | [1..385] | [1..411] |
|
|
3.0E-63 | [1..385] | [67..451] |
|
|
3.0E-48 | [4..385] | [2..382] |
|
|
3.0E-47 | [4..351] | [2..342] |
|
|
1.0E-44 | [4..385] | [2..380] |
|
|
2.0E-44 | [43..385] | [37..379] |
|
|
8.0E-44 | [4..385] | [2..382] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MSGSSGTPYL GSKISLISKA QIRYEGILYT IDTDNSTVAL AKVRSFGTED RPTDRPAPPR 60
61 EEIYEYIIFR GSDIKDITVC E
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 2fb7A |
| Description: | NMR Solution Structure of protein from Zebra Fish Dr.13312 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [82-251] |
1 11 21 31 41 51
| | | | | |
1 PPKAQHTLPQ DPAIVQSSLG SASASPFQPH VPYSPFRGMA PYGPLAASSL LSQQYAASLG 60
61 LGAGFPSIPV GKSPMVEQAV QTGSADNLNA KKLLPGKGTT GTQLNGRQAQ PSSKTASDVV 120
121 QPAAVQAQGQ VNDENRRPQR RRSGNRRTRN RSRGQNRPTN VKENTIKFEG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [252-385] |
1 11 21 31 41 51
| | | | | |
1 DFDFESANAQ FNREELDKEF KKKLNFKDDK AEKGEEKDLA VVTQSAEAPA EEDLLGPNCY 60
61 YDKSKSFFDN ISSELKTSSR RTTWAEERKL NTETFGVSGR FLRGRSSRGG FRGGRGNGTT 120
121 RRNPTSHRAG TGRV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
