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View Structure Prediction Details

Protein: gi|94988008, gi|...
Organism: Streptococcus pyogenes MGAS9429
Length: 165 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|94988008, gi|....

Description E-value Query
Range
Subject
Range
RL11_OCEIH - 50S ribosomal protein L11 OS=Oceanobacillus iheyensis GN=rplK PE=3 SV=1
RL11_OCEIH - 50S ribosomal protein L11 OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HT...
213.0 [0..25] [165..1]

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Predicted Domain #1
Region A:
Residues: [1-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYCISVGGK NLNYRQNHNR RIFKMAKKVE KLVKLQIPAG KATPAPPVGP ALGQAGINIM  60
   61 GFTKEFNART ADQAGMIIPV VISVYEDKSF DFITKTPPAA VLLKKAAGVE KGSGTPNTTK 120
  121 VATVTRAQVQ EIAETKMPDL NAANIEAAMR MIEGTARSMG FTVTD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.0
Match: 1giyL
Description: 70S ribosome functional complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle