YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15077235, gi\|...
Organism:	Homo sapiens
Length:	165 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15077235, gi|....

Description	E-value	Query Range	Subject Range
gi\|114568504 - gi\|114568504\|ref\|XP_001166981.1\| PREDICTED: glutaredoxin 2 isoform 2 [Pan troglodytes] gi\|119611654, gi... - gi\|74418838\|gb\|ABA03170.1\| glutaredoxin 2 [Homo sapiens], gi\|119611654\|gb\|EAW91248.1\| glutaredoxin 2...	2.0E-44	[1..165]	[1..165]
gi\|109019032 - gi\|109019032\|ref\|XP_001112642.1\| PREDICTED: similar to glutaredoxin 2 isoform 1 isoform 2 [Macaca mu... gi\|67970405 - gi\|67970405\|dbj\|BAE01545.1\| unnamed protein product [Macaca fascicularis]	2.0E-38	[1..165]	[1..165]
gi\|4929735 - gi\|4929735\|gb\|AAD34128.1\|AF151891_1 CGI-133 protein [Homo sapiens]	3.0E-37	[13..165]	[4..151]
GLRX2_BOVIN - Glutaredoxin-2, mitochondrial OS=Bos taurus GN=GLRX2 PE=2 SV=1	1.0E-34	[22..163]	[15..156]
GLRX2_PONPY - Glutaredoxin-2, mitochondrial precursor - Pongo pygmaeus (Orangutan) GLRX2_PONAB - Glutaredoxin-2, mitochondrial OS=Pongo abelii GN=GLRX2 PE=2 SV=1	2.0E-34	[40..165]	[36..161]
GLRX2_RAT - Glutaredoxin-2, mitochondrial OS=Rattus norvegicus GN=Glrx2 PE=2 SV=2	4.0E-34	[15..165]	[7..157]

Back

Predicted Domain #1

Region A:
Residues: [1-165]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPRDKQVSR FSPLKDVYTW VALAGIQRSG SPGRTRSAAR RMESNTSSSL ENLATAPVNQ  60
   61 IQETISDNCV VIFSKTSCSY CTMAKKLFHD MNVNYKVVEL DLLEYGNQFQ DALYKMTGER 120
  121 TVPRIFVNGT FIGGATDTHR LHKEGKLLPL VHQCYLKKSK RKEFQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.39794
Match:	2ht9A
Description:	No description for 2ht9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits