YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|33338064, gi|...
Organism: Homo sapiens
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33338064, gi|....

Description E-value Query
Range
Subject
Range
gi|50748592 - gi|50748592|ref|XP_421316.1| PREDICTED: similar to calmodulin 1; Calmodulin 1 (phosphorylase kinase,...
1.0E-32 [9..112] [571..659]
gi|94471603 - gi|94471603|gb|ABF21069.1| mitochondrial calcium sensor cameleon 4mtD3cpv [synthetic construct]
5.0E-29 [9..112] [422..510]
gi|73949176 - gi|73949176|ref|XP_850895.1| PREDICTED: similar to Calmodulin-related protein NB-1 (Calmodulin-like ...
4.0E-27 [9..112] [321..409]
gi|76628526 - gi|76628526|ref|XP_874377.1| PREDICTED: similar to calmodulin 1 [Bos taurus]
1.0E-26 [9..112] [136..224]
gi|114677917 - gi|114677917|ref|XP_512771.2| PREDICTED: similar to calmodulin [Pan troglodytes]
2.0E-26 [9..112] [182..270]

Back

Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKRAKAKT TKKRPQRATS NVFAMFDQSQ IQEFKEAFNM IDQNRDGFID KEDLHDMLAS  60
   61 LGFIHEDHLR ELLTTMGDRF TDEEVDEMYR EAPIDKKGNF NYVEFTRILK HGAKDKDD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 2f2oA
Description: Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle