YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: C12orf11
Organism: Homo sapiens
Length: 706 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for C12orf11.

Description E-value Query
Range
Subject
Range
gi|7022782 - gi|7022782|dbj|BAA91721.1| unnamed protein product [Homo sapiens]
0.0 [1..706] [1..706]
gi|114051071, gi... - gi|86438340|gb|AAI12705.1| Chromosome 12 open reading frame 11 ortholog [Bos taurus], gi|76668936|re...
0.0 [1..706] [1..706]
gi|73996936, gi|... - gi|73996936|ref|XP_543753.2| PREDICTED: similar to Protein C12orf11 (Sarcoma antigen NY-SAR-95) isof...
0.0 [1..706] [1..706]
gi|109472779, gi... - gi|109474459|ref|XP_001073788.1| PREDICTED: similar to Protein C12orf11 (Sarcoma antigen NY-SAR-95) ...
0.0 [1..706] [1..706]
gi|50729126 - gi|50729126|ref|XP_416439.1| PREDICTED: similar to Hypothetical protein FLJ10637 [Gallus gallus]
0.0 [1..706] [1..706]
M89BB_MOUSE, CL0... - Cell cycle regulator Mat89Bb homolog OS=Mus musculus PE=2 SV=1, Uncharacterized protein C12orf11 hom...
0.0 [1..706] [1..732]

Back

Predicted Domain #1
Region A:
Residues: [1-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFSESHKT VFVVDHCPYM AESCRQHVEF DMLVKNRTQG IIPLAPISKS LWTCSVESSM  60
   61 EYCRIMYDIF PFKKLVNFIV SDSGAHVLNS WTQEDQNLQE LMAALAAVGP PNPRADPECC 120
  121 SILHGLVAAV ETLCKITEYQ HEARTLLMEN AERVGNRGRI ICITNAKSDS HVRMLEDCVQ 180
  181 ETIHEHNKLA ANSDHLMQIQ KCELVLIHTY PVGEDSLVSD RSKKELSPVL TSEVHSVRAG 240
  241 RHLATKLNIL VQQHFDLAST TITNIPMKEE QHA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [274-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTSANYDVEL LHHKDAHVDF LKSGDSHLGG GSREGSFKET ITLKWCTPRT NNIELHYCTG  60
   61 AYRISPVDVN SRPSSCLTNF LLNGRSVLLE QPRKSGSKVI SHMLSSHGGE IFLHVLSSSR 120
  121 SILEDPPSIS EGCGGRVTDY RITDFGEFMR ENRLTPFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.836 N/A N/A c.23.1 CheY-like

Predicted Domain #3
Region A:
Residues: [432-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPRYKIDGSL EVPLERAKDQ LEKHTRYWPM IISQTTIFNM QAVVPLASVI VKESLTEEDV  60
   61 LNCQKTIYNL VDMERKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [509-597]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPLPISTVGT RGKGPKRDEQ YRIMWNELET LVRAHINNSE KHQRVLECLM ACRSKPPEEE  60
   61 ERKKRGRKRE DKEDKSEKAV KDYEQEKSW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.839 N/A N/A a.17.1 p8-MTCP1

Predicted Domain #5
Region A:
Residues: [598-706]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDSERLKGIL ERGKEELAEA EIIKDSPDSP EPPNKKPLVE MDETPQVEKS KGPVSLLSLW  60
   61 SNRINTANSR KHQEFAGRLN SVNNRAELYQ HLKEENGMET TENGKASRQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle