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View Structure Prediction Details

Protein: gi|13562149, gi|...
Organism: Homo sapiens
Length: 241 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13562149, gi|....

Description E-value Query
Range
Subject
Range
RGS20 - regulator of G-protein signaling 20
4.0E-69 [2..241] [140..388]
gi|114620123 - gi|114620123|ref|XP_001151118.1| PREDICTED: regulator of G-protein signalling 20 isoform 4 [Pan trog...
5.0E-69 [2..241] [140..388]
RGS20_MOUSE - Regulator of G-protein signaling 20 OS=Mus musculus GN=Rgs20 PE=1 SV=1
9.0E-67 [1..241] [1..239]
RGS20_BOVIN - Regulator of G-protein signaling 20 OS=Bos taurus GN=RGS20 PE=1 SV=2
5.0E-66 [2..241] [134..374]
gi|109086403 - gi|109086403|ref|XP_001082537.1| PREDICTED: regulator of G-protein signalling 20 isoform 4 [Macaca m...
6.0E-65 [1..241] [1..247]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTADGGEPA GASSPAGRVD GGLQMGSERM EMRKRQMPAA QDTPGAAPGQ PGAGSRGSNA  60
   61 CCFCWCCCCS CSCLTVRNQE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQRPTIASHE LRADLPTWEE SPAPTLEEVN AWAQSFDKLM VTPAGRNAFR EFLRTEFSEE  60
   61 NMLFWMACEE LKKEANKNII EEKARIIYED YISILSPKEV SLDSRVREVI NRNMVEPSQH 120
  121 IFDDAQLQIY TLMHRDSYPR FMNSAVYKDL LQSLSEKSIE A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.221849
Match: 1zv4X
Description: Structure of the Regulator of G-Protein Signaling 17 (RGSZ2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle