| Protein: | SLC12A2 |
| Organism: | Homo sapiens |
| Length: | 1212 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLC12A2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1212] | [1..1211] |
|
|
0.0 | [1..1212] | [1..1203] |
|
|
0.0 | [1..1212] | [1..1210] |
|
|
0.0 | [1..1212] | [1..1201] |
|
|
0.0 | [1..1212] | [1..1205] |
|
|
0.0 | [8..1212] | [49..1263] |
|
|
0.0 | [64..1212] | [23..1161] |
|
|
0.0 | [1..1149] | [1..1149] |
|
Region A: Residues: [1-215] |
1 11 21 31 41 51
| | | | | |
1 MEPRPTAPSS GAPGLAGVGE TPSAAALAAA RVELPGTAVP SVPEDAAPAS RDGGGVRDEG 60
61 PAAAGDGLGR PLGPTPSQSR FQVDLVSENA GRAAAAAAAA AAAAAAAGAG AGAKQTPADG 120
121 EASGESEPAK GSEEAKGRFR VNFVDPAASS SAEDSLSDAA GVGVDGPNVS FQNGGDTVLS 180
181 EGSSLHSGGG GGSGHHQHYY YDTHTNTYYL RTFGH
|
| Detection Method: |  |
| Confidence: | 5.0 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [216-262] |
1 11 21 31 41 51
| | | | | |
1 NTMDAVPRID HYRHTAAQLG EKLLRPSLAE LHDELEKEPF EDGFANG
|
| Detection Method: | |
| Confidence: | 40.119186 |
| Match: | PF08403.1 |
| Description: | No description for PF08403.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-777] |
1 11 21 31 41 51
| | | | | |
1 EESTPTRDAV VTYTAESKGV VKFGWIKGVL VRCMLNIWGV MLFIRLSWIV GQAGIGLSVL 60
61 VIMMATVVTT ITGLSTSAIA TNGFVRGGGA YYLISRSLGP EFGGAIGLIF AFANAVAVAM 120
121 YVVGFAETVV ELLKEHSILM IDEINDIRII GAITVVILLG ISVAGMEWEA KAQIVLLVIL 180
181 LLAIGDFVIG TFIPLESKKP KGFFGYKSEI FNENFGPDFR EEETFFSVFA IFFPAATGIL 240
241 AGANISGDLA DPQSAIPKGT LLAILITTLV YVGIAVSVGS CVVRDATGNV NDTIVTELTN 300
301 CTSAACKLNF DFSSCESSPC SYGLMNNFQV MSMVSGFTPL ISAGIFSATL SSALASLVSA 360
361 PKIFQALCKD NIYPAFQMFA KGYGKNNEPL RGYILTFLIA LGFILIAELN VIAPIISNFF 420
421 LASYALINFS VFHASLAKSP GWRPAFKYYN MWISLLGAIL CCIVMFVINW WAALLTYVIV 480
481 LGLYIYVTYK KPDVNWGSST QALTYLNALQ HSIRL
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [778-976] |
1 11 21 31 41 51
| | | | | |
1 SGVEDHVKNF RPQCLVMTGA PNSRPALLHL VHDFTKNVGL MICGHVHMGP RRQAMKEMSI 60
61 DQAKYQRWLI KNKMKAFYAP VHADDLREGA QYLMQAAGLG RMKPNTLVLG FKKDWLQADM 120
121 RDVDMYINLF HDAFDIQYGV VVIRLKEGLD ISHLQGQEEL LSSQEKSPGT KDVVVSVEYS 180
181 KKSDLDTSKP LSEKPITHK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [977-1032] |
1 11 21 31 41 51
| | | | | |
1 VEEEDGKTAT QPLLKKESKG PIVPLNVADQ KLLEASTQFQ KKQGKNTIDV WWLFDD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1033-1212] |
1 11 21 31 41 51
| | | | | |
1 GGLTLLIPYL LTTKKKWKDC KIRVFIGGKI NRIDHDRRAM ATLLSKFRID FSDIMVLGDI 60
61 NTKPKKENII AFEEIIEPYR LHEDDKEQDI ADKMKEDEPW RITDNELELY KTKTYRQIRL 120
121 NELLKEHSST ANIIVMSLPV ARKGAVSSAL YMAWLEALSK DLPPILLVRG NHQSVLTFYS 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
