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View Structure Prediction Details

Protein: MRPS15
Organism: Homo sapiens
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPS15.

Description E-value Query
Range
Subject
Range
gi|114555553 - gi|114555553|ref|XP_524665.2| PREDICTED: mitochondrial ribosomal protein S15 [Pan troglodytes]
2.0E-71 [1..257] [1..257]
gi|12833594 - gi|12833594|dbj|BAB22586.1| unnamed protein product [Mus musculus]
7.0E-69 [1..256] [1..258]
RT15_RAT - 28S ribosomal protein S15, mitochondrial OS=Rattus norvegicus GN=Mrps15 PE=2 SV=1
1.0E-67 [1..256] [1..257]
gi|76614526 - gi|76614526|ref|XP_585783.2| PREDICTED: similar to mitochondrial ribosomal protein S15 isoform 1 [Bo...
5.0E-64 [1..257] [1..259]
gi|12005982 - gi|12005982|gb|AAG44697.1|AF265439_1 DC37 [Homo sapiens]
2.0E-62 [1..257] [27..283]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVAWRTLS LIRTRAVTQV LVPGLPGGGS AKFPFNQWGL QPRSLLLQAA RGYVVRKPAQ  60
   61 SRLDDDPPPS TLLKDYQNVP GIEKVDDVVK RLLSLEMAN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [100-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKEMLKIKQE QFMKKIVANP EDTRSLEARI IALSVKIRSY EEHLEKHRKD KAHKRYLLMS  60
   61 IDQRKKMLKN LRNTNYDVFE KICWGLGIEY TFPPLYYRRA HRRFVTKKAL CIRVFQETQK 120
  121 LKKRRRALKA AAAAQKQAKR RNPDSPAKAI PKTLKDSQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2qalO
Description: No description for 2qalO was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle