YRC Public Data Repository - Protein Structure Prediction

Protein:	DCUN1D1
Organism:	Homo sapiens
Length:	259 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCUN1D1.

Description	E-value	Query Range	Subject Range
gi\|94369355 - gi\|94369355\|ref\|XP_992109.1\| PREDICTED: similar to RP42 homolog [Mus musculus]	0.0	[1..259]	[155..413]
gi\|114590611 - gi\|114590611\|ref\|XP_516896.2\| PREDICTED: similar to DCN1, defective in cullin neddylation 1, domain ...	0.0	[2..259]	[133..390]
gi\|109043040 - gi\|109043040\|ref\|XP_001096828.1\| PREDICTED: similar to RP42 homolog [Macaca mulatta]	0.0	[2..259]	[63..320]
gi\|18700658 - gi\|18700658\|gb\|AAL78673.1\|AF456426_1 squamous cell carcinoma-related oncoprotein [Homo sapiens]	0.0	[1..259]	[1..259]
gi\|76670639 - gi\|76670639\|ref\|XP_589968.2\| PREDICTED: similar to DCN1, defective in cullin neddylation 1, domain c...	0.0	[2..259]	[36..293]
gi\|62858725, gi\|... - gi\|89266859\|emb\|CAJ83847.1\| DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevis...	0.0	[1..259]	[1..259]
gi\|224060761 - gi\|224060761\|ref\|XP_002196452.1\| PREDICTED: RP42 homolog [Taeniopygia guttata] gi\|542151949\|ref... - PREDICTED: DCN1-like protein 1 [Zonotrichia albicollis] DCNL1_CHICK - DCN1-like protein 1 OS=Gallus gallus GN=DCUN1D1 PE=2 SV=1	0.0	[1..259]	[1..259]

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Predicted Domain #1

Region A:
Residues: [1-259]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLKSSQKD KVRQFMIFTQ SSEKTAVSCL SQNDWKLDVA TDNFFQNPEL YIRESVKGSL  60
   61 DRKKLEQLYN RYKDPQDENK IGIDGIQQFC DDLALDPASI SVLIIAWKFR AATQCEFSKQ 120
  121 EFMDGMTELG CDSIEKLKAQ IPKMEQELKE PGRFKDFYQF TFNFAKNPGQ KGLDLEMAIA 180
  181 YWNLVLNGRF KFLDLWNKFL LEHHKRSIPK DTWNLLLDFS TMIADDMSNY DEEGAWPVLI 240
  241 DDFVEFARPQ IAGTKSTTV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	51.154902
Match:	2is9A
Description:	No description for 2is9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits