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View Structure Prediction Details

Protein: ZW10
Organism: Homo sapiens
Length: 779 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ZW10.

Description E-value Query
Range
Subject
Range
ZW10_MOUSE - Centromere/kinetochore protein zw10 homolog OS=Mus musculus GN=Zw10 PE=1 SV=3
0.0 [1..779] [1..779]
gi|109108714 - gi|109108714|ref|XP_001085694.1| PREDICTED: centromere/kinetochore protein zw10 [Macaca mulatta]
0.0 [1..779] [1..778]
ZW10_PONPY - Centromere/kinetochore protein zw10 homolog - Pongo pygmaeus (Orangutan)
ZW10_PONAB - Centromere/kinetochore protein zw10 homolog OS=Pongo abelii GN=ZW10 PE=2 SV=3
0.0 [1..779] [1..779]
ZW10_RAT - Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus GN=Zw10 PE=2 SV=3
0.0 [1..779] [1..777]
gi|76635211, gi|... - gi|76635211|ref|XP_588349.2| PREDICTED: similar to Centromere/kinetochore protein zw10 homolog [Bos ...
0.0 [1..779] [1..779]
gi|73954747 - gi|73954747|ref|XP_536569.2| PREDICTED: similar to Centromere/kinetochore protein zw10 homolog isofo...
0.0 [1..779] [1..779]
gi|13364842 - gi|13364842|dbj|BAB39105.1| centromere protein ZW10 [Gallus gallus]
0.0 [27..779] [3..753]

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Predicted Domain #1
Region A:
Residues: [1-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFVTEVLA HSGRLEKEDL GTRISRLTRR VEEIKGEVCN MISKKYSEFL PSMQSAQGLI  60
   61 TQVDKLSEDI DLLKSRIESE VRRDLHVSTG EFTDLKQQLE RDSVVLSLLK QLQEFSTAIE 120
  121 EYNCALTEKK YVTGAQRLEE AQKCLKLLKS RKCFDLKILK SLSMELTIQK QNILYHLGEE 180
  181 WQKLIVWKFP PSKDTSSLES YLQTELHLYT EQSHKEEKTP MPPISSVLLA FSVLGELHSK 240
  241 LKSFGQMLLK YILRPLASCP SLHAVIESQP NIVIIRFESI MTNLEYPSPS EVFTKIRLVL 300
  301 EVLQKQLLDL PLDTDLENEK TSTVPLAEML GDMIWEDLSE CLIKNCLVYS IPTNSSKLQQ 360
  361 YEEIIQSTEE FENALKEMRF LKGDTTDLLK YARNINSHFA NKKCQDVIVA ARNLMTSEIH 420
  421 NTVKIIPDSK INVPELPTPD EDNKLEVQKV SNTQYHEVMN LEPENT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1yvlA
Description: Structure of Unphosphorylated STAT1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [467-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDQHSFSLPT CRISESVKKL MELAYQTLLE ATTSSDQCAV QLFYSVRNIF HLFHDVVPTY  60
   61 HKENLQKLPQ LAAIHHNNCM YIAHHLLTLG HQFRLRLAPI LCDGTATFVD LVPGFRRLGT 120
  121 ECFLAQMRAQ KGELLERLSS ARNFSNMDDE EN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [619-779]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSAASKAVRQ VLHQLKRLGI VWQDVLPVNI YCKAMGTLLN TAISEVIGKI TALEDISTED  60
   61 GDRLYSLCKT VMDEGPQVFA PLSEESKNKK YQEEVPVYVP KWMPFKELMM MLQASLQEIG 120
  121 DRWADGKGPL AAAFSSSEVK ALIRALFQNT ERRAAALAKI K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle