| Protein: | LMNB2 |
| Organism: | Homo sapiens |
| Length: | 600 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LMNB2.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-68 | [10..564] | [451..985] |
|
|
3.0E-52 | [1..600] | [1..600] |
|
|
3.0E-51 | [2..600] | [12..624] |
|
|
3.0E-50 | [16..600] | [40..628] |
|
|
6.0E-49 | [16..600] | [32..616] |
|
|
7.0E-49 | [1..600] | [1..583] |
|
|
8.0E-49 | [16..600] | [15..600] |
|
|
1.0E-46 | [16..600] | [14..596] |
|
Region A: Residues: [1-380] |
1 11 21 31 41 51
| | | | | |
1 MATPLPGRAG GPATPLSPTR LSRLQEKEEL RELNDRLAHY IDRVRALELE NDRLLLKISE 60
61 KEEVTTREVS GIKALYESEL ADARRVLDET ARERARLQIE IGKLRAELDE VNKSAKKREG 120
121 ELTVAQGRVK DLESLFHRSE VELAAALSDK RGLESDVAEL RAQLAKAEDG HAVAKKQLEK 180
181 ETLMRVDLEN RCQSLQEELD FRKSVFEEEV RETRRRHERR LVEVDSSRQQ EYDFKMAQAL 240
241 EELRSQHDEQ VRLYKLELEQ TYQAKLDSAK LSSDQNDKAA SAAREELKEA RMRLESLSYQ 300
301 LSGLQKQASA AEDRIRELEE AMAGERDKFR KMLDAKEQEM TEMRDVMQQQ LAEYQELLDV 360
361 KLALDMEINA YRKLLEGEEE
|
| Detection Method: |  |
| Confidence: | 13.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [381-428] |
1 11 21 31 41 51
| | | | | |
1 RLKLSPSPSS RVTVSRATSS SSGSLSATGR LGRSKRKRLE VEEPLGSG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [429-600] |
1 11 21 31 41 51
| | | | | |
1 PSVLGTGTGG SGGFHLAQQA SASGSVSIEE IDLEGKFVQL KNNSDKDQSL GNWRIKRQVL 60
61 EGEEIAYKFT PKYILRAGQM VTVWAAGAGV AHSPPSTLVW KGQSSWGTGE SFRTVLVNAD 120
121 GEEVAMRTVK KSSVMRENEN GEEEEEEAEF GEEDLFHQQG DPRTTSRGCY VM
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1ivtA |
| Description: | Lamin A/C globular tail domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.29024114419453 | bayes_pls_golite062009 |
| protein binding | 1.13460840277514 | bayes_pls_golite062009 |
| structural molecule activity | 0.619687426425363 | bayes_pls_golite062009 |
