YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MON1A
Organism: Homo sapiens
Length: 555 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MON1A.

Description E-value Query
Range
Subject
Range
gi|114586954 - gi|114586954|ref|XP_001166744.1| PREDICTED: MON1 homolog A isoform 4 [Pan troglodytes]
0.0 [1..555] [98..652]
gi|13874543 - gi|13874543|dbj|BAB46888.1| hypothetical protein [Macaca fascicularis]
0.0 [1..555] [23..577]
gi|73985759 - gi|73985759|ref|XP_850897.1| PREDICTED: similar to MON1 homolog A [Canis familiaris]
0.0 [1..555] [24..578]
gi|238011010 - gi|238011010|gb|ACR36540.1| unknown [Zea mays]
gi|34865922, gi|... - gi|34865922|ref|XP_236627.2| PREDICTED: similar to MON1 homolog A [Rattus norvegicus], gi|171847082|...
0.0 [1..555] [1..555]
MON1A_MOUSE - Vacuolar fusion protein MON1 homolog A OS=Mus musculus GN=Mon1a PE=1 SV=3
0.0 [1..555] [1..556]
MON1A_BOVIN - Vacuolar fusion protein MON1 homolog A OS=Bos taurus GN=MON1A PE=2 SV=1
0.0 [1..555] [1..555]

Back

Predicted Domain #1
Region A:
Residues: [1-147]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDMQRKRS SECLDGTLTP SDGQSMERAE SPTPGMAQGM EPGAGQEGAM FVHARSYEDL  60
   61 TESEDGAASG DSHKEGTRGP PPLPTDMRQI SQDFSELSTQ LTGVARDLQE EMLPGSSEDW 120
  121 LEPPGAVGRP ATEPPREGTT EGDEEDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1oqyA
Description: Structure of the DNA repair protein hHR23a
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.865853644587457 bayes_pls_golite062009
protein binding 0.256831192363953 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [148-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEAWRLHQKH VFVLSEAGKP VYSRYGSEEA LSSTMGVMVA LVSFLEADKN AIRSIHADGY  60
   61 KVVFVRRSPL VLVAVARTRQ SAQELAQELL YIYYQILSLL TGAQLSHIFQ QKQNYDLRRL 120
  121 LSGSERITDN LLQLMARDPS FLMGAARCLP LAAAVRDTVS ASLQQARARS LVFSILLARN 180
  181 QLVALVRRKD QFLHPIDLHL LFNLISSSSS FREGEAWTPV C

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.11
Match: 1w63Q
Description: AP1 clathrin adaptor core
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [369-555]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPKFNAAGFF HAHISYLEPD TDLCLLLVST DREDFFAVSD CRRRFQERLR KRGAHLALRE  60
   61 ALRTPYYSVA QVGIPDLRHF LYKSKSSGLF TSPEIEAPYT SEEEQERLLG LYQYLHSRAH 120
  121 NASRPLKTIY YTGPNENLLA WVTGAFELYM CYSPLGTKAS AVSAIHKLMR WIRKEEDRLF 180
  181 ILTPLTY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle