| Protein: | GORASP1 |
| Organism: | Homo sapiens |
| Length: | 440 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GORASP1.
| Description | E-value | Query Range |
Subject Range |
|
|
8.0E-46 | [1..438] | [1..440] |
|
|
3.0E-41 | [21..440] | [62..481] |
|
|
9.0E-40 | [1..438] | [1..440] |
|
|
2.0E-39 | [1..440] | [1..438] |
|
|
9.0E-38 | [1..230] | [1..230] |
|
|
7.0E-37 | [1..440] | [1..436] |
|
|
3.0E-30 | [1..422] | [1..425] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MGLGVSAEQP AGGAEGFHLH GVQENSPAQQ AGLEPYFDFI ITIGHSRLNK ENDTLKALLK 60
61 ANVEKPVKLE VFNMKTMRVR EVEVVPSNMW GGQGLLGASV RFCSFRRASE QVWHVLDVEP 120
121 SSPAALAGLR PYTDYVVGSD QILQE
|
| Detection Method: |  |
| Confidence: | 26.39794 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.68229896967807 | bayes_pls_golite062009 |
| protein binding | 2.56614509742143 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.49196113035732 | bayes_pls_golite062009 |
|
Region A: Residues: [146-231] |
1 11 21 31 41 51
| | | | | |
1 SEDFFTLIES HEGKPLKLMV YNSKSDSCRE VTVTPNAAWG GEGSLGCGIG YGYLHRIPTQ 60
61 PPSYHKKPPG TPPPSALPLG APPPDA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.337 | a.74.1 | Cyclin-like |
| View | Download | 0.498 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.725 | c.55.4 | Translational machinery components |
| View | Download | 0.605 | c.55.4 | Translational machinery components |
| View | Download | 0.493 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
|
Region A: Residues: [232-440] |
1 11 21 31 41 51
| | | | | |
1 LPPGPTPEDS PSLETGSRQS DYMEALLQAP GSSMEDPLPG PGSPSHSAPD PDGLPHFMET 60
61 PLQPPPPVQR VMDPGFLDVS GISLLDNSNA SVWPSLPSST ELTTTAVSTS GPEDICSSSS 120
121 SHERGGEATW SGSEFEVSFL DSPGAQAQAD HLPQLTLPDS LTSAASPEDG LSAELLEAQA 180
181 EEEPASTEGL DTGTEAEGLD SQAQISTTE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
