| Protein: | gi|12698037 |
| Organism: | Homo sapiens |
| Length: | 1098 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12698037.
| Description | E-value | Query Range |
Subject Range |
|
|
988.0 | [0..6] | [1098..3] |
|
|
975.0 | [0..10] | [1098..6] |
|
|
967.0 | [0..2] | [1098..43] |
|
|
894.0 | [0..6] | [952..3] |
|
|
841.0 | [0..36] | [1098..82] |
|
|
646.0 | [0..12] | [988..11] |
|
|
509.0 | [0..336] | [1098..55] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 YTPVMAARQA VGSGAQETCG LDRILEALKL LLSPGGSGSS SLQVTKHDVL LATLKSNLSA 60
61 LEDKFLKDPQ WKNLKLLRDE IADKAEWPQN SVDVTWSFTS QTLLLLLCLK ETMIRLAANF 120
121 NPGKPNPRT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.790 | a.24.18 | Description not found. |
| View | Download | 0.684 | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.667 | a.24.3 | Cytochromes |
| View | Download | 0.615 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.614 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.607 | a.24.4 | Hemerythrin |
| View | Download | 0.588 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.587 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.558 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.307 | a.24.23 | Description not found. |
| View | Download | 0.247 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.240 | a.278.1 | Description not found. |
|
Region A: Residues: [130-339] |
1 11 21 31 41 51
| | | | | |
1 PEVAPALSPD ALSISQQKTV QFVLQFVVTL GICPYLMPGV GVPLRYRTEF GAVVQDVVCF 60
61 DAAPDATRRL YTSCKALLNV AQHTSLGSLI FCHHFGDIAA GLCQLGFCPT KRKLLTPAEE 120
121 VLTEEERTLS RGALRDMLDQ VYQPLAVREL LILQGGPPQS CTDVKTQMRC RAPAWLRRLC 180
181 GQLLSERLMR PNGVQAVVRG ILEGAGAGAA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [340-1098] |
1 11 21 31 41 51
| | | | | |
1 GGSDAEVTAA DWKKCDLIAK ILASCPQQSL SPENYYRDIC PQVLDLFHFQ DKLTARQFQR 60
61 VATTTFITLS RERPHLAAKY LLQPVLAPLH RCLNTAELSE SDMVPGTILV TEEELSRCIE 120
121 DVFKVYVVGN EPLTVLMDSL LPVLGVLFLL YCFTKQSVSH IRSLCQEILL WILGKLERKK 180
181 AIASLKGFAG LDKAVPSLHS LCQFRVATQG GIMITIKEAI SDEDEDEALY QKVSSEQGRV 240
241 EHLGDLLSHC QECGLAGDFF IFCLKELTHV ASENETELKT EPFSSKSLLE LEQHQTLLVE 300
301 GQERKLLVLQ LMAVLCERMS EQIFTNVTQV VDFVAATLQR ACASLAHQAE STVESQTLSM 360
361 SMGLVAVMLG GAVQLKSSDF AVLKQLLPLL EKVSNTYPDP VIQELAVDLR ITISTHGAFA 420
421 TEAVSMAAQS TLNRKDLEGK IEEQQQTSHE RPTDVAHSHL EQQQSHETAP QTGLQSNAPI 480
481 IPQGVNEPST TTSQKSGSVT TEQLQEVLLS AYDPQIPTRA AALRTLSHWI EQREAKALEM 540
541 QEKLLKIFLE NLEHEDTFVY LSAIQGVALL SDVYPEKILP DLLAQYDSSK DKHTPETRMK 600
601 VGEVLMRIVR ALGDMVSKYR EPLIHTFLRG VRDPDGAHRA SSLANLGELC QRLDFLLGSV 660
661 VHEVTACLIA VAKTDGEVQV RRAAIHVVVL LLRGLSQKAT EVLSAVLKDL YHLLKHVVCL 720
721 EPDDVAKLHA QLALEELDDI MKNFLFPPQK LEKKIMVLP
|
| Detection Method: | |
| Confidence: | 43.045757 |
| Match: | 2ot8A |
| Description: | No description for 2ot8A was found. |
