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View Structure Prediction Details

Protein: AKIRIN2
Organism: Homo sapiens
Length: 203 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AKIRIN2.

Description E-value Query
Range
Subject
Range
AKIR2_BOVIN - Akirin-2 OS=Bos taurus GN=AKIRIN2 PE=2 SV=1
288.0 [0..1] [203..1]
gi|62896961 - gi|62896961|dbj|BAD96421.1| hypothetical protein FLJ10342 variant [Homo sapiens]
287.0 [0..1] [203..1]
gi|73973446 - gi|73973446|ref|XP_867886.1| PREDICTED: similar to CG8580-PA, isoform A isoform 4 [Canis familiaris]
285.0 [0..1] [203..1]
gi|45360463, gi|... - gi|89272789|emb|CAJ82302.1| novel protein [Xenopus tropicalis], gi|45360463|ref|NP_988914.1| akirin ...
279.0 [0..1] [203..1]
AKIR2_RAT - Akirin-2 OS=Rattus norvegicus GN=Akirin2 PE=1 SV=1
277.0 [0..1] [203..1]
AKIR1_MOUSE - Akirin-1 OS=Mus musculus GN=Akirin1 PE=1 SV=1
277.0 [0..1] [203..1]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACGATLKRT LDFDPLLSPA SPKRRRCAPL SAPTSAAASP LSAAAATAAS FSAAAASPQK  60
   61 YLRMEPSPFG DVSSRLTTEQ ILYNIKQEYK RMQKRRHLET SFQQTDPCCT SDAQPHAFLL 120
  121 SGPASPGTSS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AASSPLKKEQ PLFTLRQVGM ICERLLKERE EKVREEYEEI LNTKLAEQYD AFVKFTHDQI  60
   61 MRRYGEQPAS YVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle