| Protein: | gi|31419634, gi|... |
| Organism: | Homo sapiens |
| Length: | 818 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31419634, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..818] | [9..826] |
|
|
0.0 | [1..818] | [69..886] |
|
|
0.0 | [28..818] | [20..810] |
|
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0.0 | [1..818] | [132..949] |
|
|
0.0 | [45..818] | [77..850] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 AKRQEDKTMS KGPGPGGSAA SSAPPAATAQ VLQAQPEKPQ HYTYLKEFRT EQCPLFVQHK 60
61 CTQHRPYTCF HWHFVNQRRR RSIRRRDGTF NYSPDVY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-168] |
1 11 21 31 41 51
| | | | | |
1 CTKYDEATGL CPEGDECPFL HRTTGDTERR YHLRYYKTGI CIHETDSKGN CTKNGLHCAF 60
61 AHGPHDLRSP V
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1rgoA |
| Description: | Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [169-335] |
1 11 21 31 41 51
| | | | | |
1 YDIRELQAME ALQNGQTTVE GSIEGQSAGA ASHAMIEKIL SEEPRWQETA YVLGNYKTEP 60
61 CKKPPRLCRQ GYACPYYHNS KDRRRSPRKH KYRSSPCPNV KHGDEWGDPG KCENGDACQY 120
121 CHTRTEQQFH PEIYKSTKCN DMQQSGSCPR GPFCAFAHVE QPPLSDD
|
| Detection Method: | |
| Confidence: | 1.67 |
| Match: | 2e5sA |
| Description: | No description for 2e5sA was found. |
|
Region A: Residues: [336-440] |
1 11 21 31 41 51
| | | | | |
1 LQPSSAVSSP TQPGPVLYMP SAAGDSVPVS PSSPHAPDLS ALLCRNSSLG SPSNLCGSPP 60
61 GSIRKPPNLE GIVFPGESGL APGSYKKAPG FEREDQVGAE YLKNF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [441-818] |
1 11 21 31 41 51
| | | | | |
1 KCQAKLKPHS LEPRSQEQPL LQPKQDMLGI LPAGSPLTSS ISSSITSSLA ATPPSPVGTS 60
61 SVPGMNANAL PFYPTSDTVE SVIESALDDL DLNEFGVAAL EKTFDNSTVP HPGSITIGGS 120
121 LLQSSAPVNI PGSLGSSASF HSASPSPPVS LSSHFLQQPQ GHLSQSENTF LGTSASHGSL 180
181 GLNGMNSSIW EHFASGSFSP GTSPAFLSGP GAAELARLRQ ELDEANSTIK QWEESWKQAK 240
241 QACDAWKKEA EEAGERASAA GAECELAREQ RDALEVQVKK LQEELERLHA GPEPQALPAF 300
301 SDLEALSLST LYSLQKQLRA HLEQVDKAVF HMQSVKCLKC QEQKRAVLPC QHAALCELCA 360
361 EGSECPICQP GRAHTLQS
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
