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View Structure Prediction Details

Protein: TCF25
Organism: Homo sapiens
Length: 676 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TCF25.

Description E-value Query
Range
Subject
Range
gi|74181406, gi|... - gi|74220156|dbj|BAE31265.1| unnamed protein product [Mus musculus], gi|74212538|dbj|BAE31009.1| unna...
0.0 [1..676] [1..676]
gi|109508259, gi... - gi|109509029|ref|XP_001079503.1| PREDICTED: similar to Protein FKSG26 [Rattus norvegicus], gi|109508...
0.0 [1..662] [1..663]
gi|109129525 - gi|109129525|ref|XP_001090795.1| PREDICTED: similar to NULP1 isoform 3 [Macaca mulatta]
0.0 [1..676] [1..676]
gi|73956789 - gi|73956789|ref|XP_849916.1| PREDICTED: similar to FKSG26 protein isoform 1 [Canis familiaris]
0.0 [1..676] [1..677]
gi|114664216 - gi|114664216|ref|XP_511180.2| PREDICTED: NULP1 [Pan troglodytes]
0.0 [58..676] [15..632]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRALRRLR GEQRGQEPLG PGALHFDLRD DDDAEEEGPK RELGVRRPGG AGKEGVRVNN  60
   61 RFELINIDDL EDDPVVNGER SGCALTDAVA PGNKGRGQRG NTESKTDGDD TETVPSEQSH 120
  121 ASGKLRKKKK KQKNKKSSTG EASENGLEDI DRILERIEDS TGLNRPGPAP LSSR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KHVLYVEHRH LNPDTELKRY FGARAILGEQ RPRQRQRVYP KCTWLTTPKS TWPRYSKPGL  60
   61 SMRLLESKKG LSFFAFEHSE EYQQAQHKFL VAVESMEPNN IVVLLQTSPY HVDSLLQLSD 120
  121 ACRFQEDQEM ARDLVERALY SMECAFHPLF SLTSGACRLD YRRPENRSFY LALYKQMSFL 180
  181 EKRGCPRTAL EYCKLILSLE PDEDPLCMLL LIDHLALRAR NYEYLIRLF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.02
Match: 2r5sA
Description: No description for 2r5sA was found.

Predicted Domain #3
Region A:
Residues: [404-505]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEWEAHRNLS QLPNFAFSVP LAYFLLSQQT DLPECEQSSA RQKASLLIQQ ALTMFPGVLL  60
   61 PLLESCSVRP DASVSSHRFF GPNAEISQPP ALSQLVNLYL GR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [506-676]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHFLWKEPAT MSWLEENVHE VLQAVDAGDP AVEACENRRK VLYQRAPRNI HRHVILSEIK  60
   61 EAVAALPPDV TTQSVMGFDP LPPSDTIYSY VRPERLSPIS HGNTIALFFR SLLPNYTMEG 120
  121 ERPEEGVAGG LNRNQGLNRL MLAVRDMMAN FHLNDLEAPH EDDAEGEGEW D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle