| Protein: | NMD3 |
| Organism: | Homo sapiens |
| Length: | 503 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NMD3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..503] | [167..669] |
|
|
0.0 | [1..503] | [1..503] |
|
|
0.0 | [1..503] | [1..503] |
|
|
0.0 | [1..503] | [1..503] |
|
|
0.0 | [1..503] | [1..503] |
|
|
0.0 | [1..503] | [1..503] |
|
|
0.0 | [1..503] | [1..503] |
|
|
0.0 | [1..503] | [165..667] |
|
|
0.0 | [1..503] | [1..503] |
|
|
0.0 | [1..503] | [1..503] |
|
Region A: Residues: [1-73] |
1 11 21 31 41 51
| | | | | |
1 MEYMAESTDR SPGHILCCEC GVPISPNPAN ICVACLRSKV DISQGIPKQV SISFCKQCQR 60
61 YFQPPGTWIQ CAL
|
| Detection Method: |  |
| Confidence: | 0.975 |
| Match: | 1z2qA |
| Description: | High-resolution solution structure of the LM5-1 FYVE domain from Leishmania major |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [74-249] |
1 11 21 31 41 51
| | | | | |
1 ESRELLALCL KKIKAPLSKV RLVDAGFVWT EPHSKRLKVK LTIQKEVMNG AILQQVFVVD 60
61 YVVQSQMCGD CHRVEAKDFW KAVIQVRQKT LHKKTFYYLE QLILKYGMHQ NTLRIKEIHD 120
121 GLDFYYSSKQ HAQKMVEFLQ CTVPCRYKAS QRLISQDIHS NTYNYKSTFS VEIVPI
|
| Detection Method: | |
| Confidence: | 70.60206 |
| Match: | PF04981.4 |
| Description: | No description for PF04981.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.463 | N/A | N/A | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.439 | N/A | N/A | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.435 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.413 | N/A | N/A | d.58.26 | GHMP Kinase, C-terminal domain |
| View | Download | 0.390 | N/A | N/A | c.95.1 | Thiolase-like |
|
Region A: Residues: [250-410] |
1 11 21 31 41 51
| | | | | |
1 CKDNVVCLSP KLAQSLGNMN QICVCIRVTS AIHLIDPNTL QVADIDGSTF WSHPFNSLCH 60
61 PKQLEEFIVM ECSIVQDIKR AAGAGMISKK HTLGEVWVQK TSEMNTDKQY FCRTHLGHLL 120
121 NPGDLVLGFD LANCNLNDEH VNKMNSDRVP DVVLIKKSYD R
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [411-503] |
1 11 21 31 41 51
| | | | | |
1 TKRQRRRNWK LKELAREREN MDTDDERQYQ DFLEDLEEDE AIRKNVNIYR DSAIPVESDT 60
61 DDEGAPRISL AEMLEDLHIS QDATGEEGAS MLT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
