YRC Public Data Repository - Protein Structure Prediction

Protein:	DDIT4L
Organism:	Homo sapiens
Length:	193 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DDIT4L.

Description	E-value	Query Range	Subject Range
gi\|114595378, gi... - gi\|114595382\|ref\|XP_001168002.1\| PREDICTED: DNA-damage-inducible transcript 4-like isoform 2 [Pan tr...	2.0E-88	[1..193]	[1..193]
gi\|17432247 - gi\|17432247\|gb\|AAL39013.1\|AF327512_1 SMHS1 [Mus musculus]	2.0E-87	[1..191]	[1..191]
DDT4L_PONAB - DNA damage-inducible transcript 4-like protein OS=Pongo abelii GN=DDIT4L PE=2 SV=1 gi\|55730376 - gi\|55730376\|emb\|CAH91910.1\| hypothetical protein [Pongo abelii]	2.0E-86	[1..193]	[1..193]
DDT4L_RAT - DNA damage-inducible transcript 4-like protein OS=Rattus norvegicus GN=Ddit4l PE=2 SV=1	3.0E-84	[1..191]	[1..191]
gi\|74002280 - gi\|74002280\|ref\|XP_544999.2\| PREDICTED: similar to DNA-damage-inducible transcript 4-like [Canis fam...	6.0E-84	[1..191]	[1..191]
gi\|76619503 - gi\|76619503\|ref\|XP_588133.2\| PREDICTED: similar to DNA-damage-inducible transcript 4-like, partial [...	4.0E-73	[1..170]	[1..170]
gi\|109089524 - gi\|109089524\|ref\|XP_001105457.1\| PREDICTED: similar to RTP801 [Macaca mulatta]	1.0E-71	[6..183]	[475..650]

Back

Predicted Domain #1

Region A:
Residues: [1-193]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATGSLSSK NPASISELLD CGYHPESLLS DFDYWDYVVP EPNLNEVIFE ESTCQNLVKM  60
   61 LENCLSKSKQ TKLGCSKVLV PEKLTQRIAQ DVLRLSSTEP CGLRGCVMHV NLEIENVCKK 120
  121 LDRIVCDSSV VPTFELTLVF KQENCSWTSF RDFFFSRGRF SSGFRRTLIL SSGFRLVKKK 180
  181 LYSLIGTTVI EGS

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	73.677781
Match:	PF07809.2
Description:	No description for PF07809.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits