YRC Public Data Repository - Protein Structure Prediction

Protein:	DDAH1
Organism:	Homo sapiens
Length:	285 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DDAH1.

Description	E-value	Query Range	Subject Range
DDAH1_MOUSE - N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Mus musculus GN=Ddah1 PE=1 SV=3	1.0E-75	[1..285]	[1..285]
DDAH1_RAT - N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus GN=Ddah1 PE=1 SV=3	6.0E-75	[1..285]	[1..285]
gi\|114557500 - gi\|114557500\|ref\|XP_001142408.1\| PREDICTED: similar to NG,NG-dimethylarginine dimethylaminohydrolase...	6.0E-75	[1..285]	[1..285]
gi\|57088769 - gi\|57088769\|ref\|XP_547303.1\| PREDICTED: similar to dimethylarginine dimethylaminohydrolase 1 [Canis ...	3.0E-72	[1..285]	[1..285]
DDH1_BOVIN, DDAH... - (P56965) NG,NG-dimethylarginine dimethylaminohydrolase 1 (EC 3.5.3.18) (Dimethylargininase 1) (Dimet...	2.0E-70	[2..285]	[1..284]
gi\|30268648, gi\|... - gi\|45383392\|ref\|NP_989713.1\| dimethylarginine dimethylaminohydrolase 1 [Gallus gallus], gi\|30268648\|...	3.0E-69	[1..281]	[1..283]
gi\|33417138, gi\|... - gi\|33417138\|gb\|AAH56074.1\| Ddah1-prov protein [Xenopus laevis], gi\|147901998\|ref\|NP_001080883.1\| dim...	1.0E-68	[1..282]	[1..281]
gi\|115527576, gi... - gi\|187608183\|ref\|NP_001120524.1\| hypothetical protein LOC100145661 [Xenopus (Silurana) tropicalis], ...	6.0E-68	[1..283]	[1..282]
gi\|49088232 - gi\|49088232\|gb\|AAT51546.1\| PA5171 [synthetic construct]	1.0E-63	[3..282]	[100..414]
ARCA_PSEAE - Arginine deiminase OS=Pseudomonas aeruginosa GN=arcA PE=1 SV=2 ARCA_PSEAE - Arginine deiminase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) G...	1.0E-63	[3..282]	[100..414]

Back

Predicted Domain #1

Region A:
Residues: [1-285]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLGHPAAF GRATHAVVRA LPESLGQHAL RSAKGEEVDV ARAERQHQLY VGVLGSKLGL  60
   61 QVVELPADES LPDCVFVEDV AVVCEETALI TRPGAPSRRK EVDMMKEALE KLQLNIVEMK 120
  121 DENATLDGGD VLFTGREFFV GLSKRTNQRG AEILADTFKD YAVSTVPVAD GLHLKSFCSM 180
  181 AGPNLIAIGS SESAQKALKI MQQMSDHRYD KLTVPDDIAA NCIYLNIPNK GHVLLHRTPE 240
  241 EYPESAKVYE KLKDHMLIPV SMSELEKVDG LLTCCSVLIN KKVDS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.69897
Match:	2jaiA
Description:	No description for 2jaiA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits