| Protein: | EXOSC10 |
| Organism: | Homo sapiens |
| Length: | 885 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXOSC10.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..885] | [1..887] |
|
|
0.0 | [1..885] | [1..885] |
|
|
0.0 | [1..885] | [1..884] |
|
|
0.0 | [38..885] | [164..1012] |
|
|
0.0 | [1..885] | [1..860] |
|
|
0.0 | [1..885] | [1..887] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MAPPSTREPR VLSATSATKS DGEMVLPGFP DADSFVKFAL GSVVAVTKAS GGLPQFGDEY 60
61 DFYRSFPGFQ AFCETQGDRL LQCMSRVMQY HGCRSNIKDR SKVTELEDKF DLLVDANDVI 120
121 LERVGILLDE ASGVNKNQQP VLPAGLQVPK TVVSSWNRKA AEYGKKAKSE TFRLLHAKN
|
| Detection Method: |  |
| Confidence: | 24.69897 |
| Match: | 1ut5A |
| Description: | Divalent metal ions (manganese) bound to T5 5'-exonuclease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 0.0362350320953433 | bayes_pls_golite062009 |
|
Region A: Residues: [180-586] |
1 11 21 31 41 51
| | | | | |
1 IIRPQLKFRE KIDNSNTPFL PKIFIKPNAQ KPLPQALSKE RRERPQDRPE DLDVPPALAD 60
61 FIHQQRTQQV EQDMFAHPYQ YELNHFTPAD AVLQKPQPQL YRPIEETPCH FISSLDELVE 120
121 LNEKLLNCQE FAVDLEHHSY RSFLGLTCLM QISTRTEDFI IDTLELRSDM YILNESLTDP 180
181 AIVKVFHGAD SDIEWLQKDF GLYVVNMFDT HQAARLLNLG RHSLDHLLKL YCNVDSNKQY 240
241 QLADWRIRPL PEEMLSYARD DTHYLLYIYD KMRLEMWERG NGQPVQLQVV WQRSRDICLK 300
301 KFIKPIFTDE SYLELYRKQK KHLNTQQLTA FQLLFAWRDK TARREDESYG YVLPNHMMLK 360
361 IAEELPKEPQ GIIACCNPVP PLVRQQINEM HLLIQQAREM PLLKSEV
|
| Detection Method: | |
| Confidence: | 53.30103 |
| Match: | 2hbjA |
| Description: | No description for 2hbjA was found. |
|
Region A: Residues: [587-733] |
1 11 21 31 41 51
| | | | | |
1 AAGVKKSGPL PSAERLENVL FGPHDCSHAP PDGYPIIPTS GSVPVQKQAS LFPDEKEDNL 60
61 LGTTCLIATA VITLFNEPSA EDSKKGPLTV AQKKAQNIME SFENPFRMFL PSLGHRAPVS 120
121 QAAKFDPSTK IYEISNRWKL AQVQVQK
|
| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 1qtmA |
| Description: | Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [734-885] |
1 11 21 31 41 51
| | | | | |
1 DSKEAVKKKA AEQTAAREQA KEACKAAAEQ AISVRQQVVL ENAAKKRERA TSDPRTTEQK 60
61 QEKKRLKISK KPKDPEPPEK EFTPYDYSQS DFKAFAGNSK SKVSSQFDPN KQTPSGKKCI 120
121 AAKKIKQSVG NKSMSFPTGK SDRGFRYNWP QR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
