| Protein: | CCDC90A |
| Organism: | Homo sapiens |
| Length: | 359 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCDC90A.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-77 | [1..359] | [1..363] |
|
|
4.0E-72 | [39..359] | [1..321] |
|
|
7.0E-72 | [1..341] | [1..341] |
|
|
6.0E-71 | [1..359] | [94..429] |
|
|
4.0E-65 | [1..359] | [1..340] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MDCGSVGGQR TQRLPGRQRL LFLPVGLSGR PGGSETSARR CLSALSDGLG ALRPRAPAAR 60
61 GGVSRASPLL LLLLVPSPRL AAAAPRRQLG DWERSRLGYA APPAGRSSAW RCSPGVAAAA 120
121 GALPQYHGPA PALVSCRREL SLSAGSLQLE R
|
| Detection Method: |  |
| Confidence: | 4.39794 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
|
Region A: Residues: [152-359] |
1 11 21 31 41 51
| | | | | |
1 KRRDFTSSGS RKLYFDTHAL VCLLEDNGFA TQQAEIIVSA LVKILEANMD IVYKDMVTKM 60
61 QQEITFQQVM SQIANVKKDM IILEKSEFSA LRAENEKIKL ELHQLKQQVM DEVIKVRTDT 120
121 KLDFNLEKSR VKELYSLNEK KLLELRTEIV ALHAQQDRAL TQTDRKIETE VAGLKTMLES 180
181 HKLDNIKYLA GSIFTCLTVA LGFYRLWI
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1epwA |
| Description: | Botulinum neurotoxin |
Matching Structure (courtesy of the PDB): |
|
