| Protein: | DME_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1987 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for DME_ARATH.
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Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MNSRADPGDR YFRVPLENQT QQEFMGSWIP FTPKKPRSSL MVDERVINQD LNGFPGGEFV 60
61 DRGFCNTGVD HNGVFDHGAH QGVTNLSMMI NSLAGSHAQA WSNSERDLLG RSEVTSPLAP 120
121 VIRNTTGNVE PVNGNFTSDV GMVNGPFTQS GTSQAGYNEF ELDDLLNPDQ MPFSFTSLLS 180
181 GGDSLFKVRQ YGPPACNKPL YNLNSPIRRE AVGSVCESSF QYVPSTPSLF RTGEKTGFLE 240
241 QIVTT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [246-318] |
1 11 21 31 41 51
| | | | | |
1 TGHEIPEPKS DKSMQSIMDS SAVNATEATE QNDGSRQDVL EFDLNKTPQQ KPSKRKRKFM 60
61 PKVVVEGKPK RKP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [319-443] |
1 11 21 31 41 51
| | | | | |
1 RKPAELPKVV VEGKPKRKPR KAATQEKVKS KETGSAKKKN LKESATKKPA NVGDMSNKSP 60
61 EVTLKSCRKA LNFDLENPGD ARQGDSESEI VQNSSGANSF SEIRDAIGGT NGSFLDSVSQ 120
121 IDKTN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [444-649] |
1 11 21 31 41 51
| | | | | |
1 GLGAMNQPLE VSMGNQPDKL STGAKLARDQ QPDLLTRNQQ CQFPVATQNT QFPMENQQAW 60
61 LQMKNQLIGF PFGNQQPRMT IRNQQPCLAM GNQQPMYLIG TPRPALVSGN QQLGGPQGNK 120
121 RPIFLNHQTC LPAGNQLYGS PTDMHQLVMS TGGQQHGLLI KNQQPGSLIR GQQPCVPLID 180
181 QQPATPKGFT HLNQMVATSM SSPGLR
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [650-871] |
1 11 21 31 41 51
| | | | | |
1 PHSQSQVPTT YLHVESVSRI LNGTTGTCQR SRAPAYDSLQ QDIHQGNKYI LSHEISNGNG 60
61 CKKALPQNSS LPTPIMAKLE EARGSKRQYH RAMGQTEKHD LNLAQQIAQS QDVERHNSST 120
121 CVEYLDAAKK TKIQKVVQEN LHGMPPEVIE IEDDPTDGAR KGKNTASISK GASKGNSSPV 180
181 KKTAEKEKCI VPKTPAKKGR AGRKKSVPPP AHASEIQLWQ PT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [872-947] |
1 11 21 31 41 51
| | | | | |
1 PPKTPLSRSK PKGKGRKSIQ DSGKARGPSG ELLCQDSIAE IIYRMQNLYL GDKEREQEQN 60
61 AMVLYKGDGA LVPYES
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [948-1141] |
1 11 21 31 41 51
| | | | | |
1 KKRKPRPKVD IDDETTRIWN LLMGKGDEKE GDEEKDKKKE KWWEEERRVF RGRADSFIAR 60
61 MHLVQGDRRF SPWKGSVVDS VIGVFLTQNV SDHLSSSAFM SLAARFPPKL SSSREDERNV 120
121 RSVVVEDPEG CILNLNEIPS WQEKVQHPSD MEVSGVDSGS KEQLRDCSNS GIERFNFLEK 180
181 SIQNLEEEVL SSQD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1142-1267] |
1 11 21 31 41 51
| | | | | |
1 SFDPAIFQSC GRVGSCSCSK SDAEFPTTRC ETKTVSGTSQ SVQTGSPNLS DEICLQGNER 60
61 PHLYEGSGDV QKQETTNVAQ KKPDLEKTMN WKDSVCFGQP RNDTNWQTTP SSSYEQCATR 120
121 QPHVLD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1268-1416] |
1 11 21 31 41 51
| | | | | |
1 IEDFGMQGEG LGYSWMSISP RVDRVKNKNV PRRFFRQGGS VPREFTGQII PSTPHELPGM 60
61 GLSGSSSAVQ EHQDDTQHNQ QDEMNKASHL QKTFLDLLNS SEECLTRQSS TKQNITDGCL 120
121 PRDRTAEDVV DPLSNNSSLQ NILVESNSS
|
| Detection Method: | |
| Confidence: | 40.69897 |
| Match: | 1hu0A |
| Description: | 8-oxoguanine glycosylase |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [1417-1805] |
1 11 21 31 41 51
| | | | | |
1 NKEQTAVEYK ETNATILREM KGTLADGKKP TSQWDSLRKD VEGNEGRQER NKNNMDSIDY 60
61 EAIRRASISE ISEAIKERGM NNMLAVRIKD FLERIVKDHG GIDLEWLRES PPDKAKDYLL 120
121 SIRGLGLKSV ECVRLLTLHN LAFPVDTNVG RIAVRMGWVP LQPLPESLQL HLLELYPVLE 180
181 SIQKFLWPRL CKLDQRTLYE LHYQLITFGK VFCTKSRPNC NACPMRGECR HFASAYASAR 240
241 LALPAPEERS LTSATIPVPP ESYPPVAIPM IELPLPLEKS LASGAPSNRE NCEPIIEEPA 300
301 SPGQECTEIT ESDIEDAYYN EDPDEIPTIK LNIEQFGMTL REHMERNMEL QEGDMSKALV 360
361 ALHPTTTSIP TPKLKNISRL RTEHQVYEL
|
| Detection Method: | |
| Confidence: | 79.221849 |
| Match: | 1rrqA |
| Description: | MutY adenine glycosylase in complex with DNA containing an A:oxoG pair |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [1806-1987] |
1 11 21 31 41 51
| | | | | |
1 PDSHRLLDGM DKREPDDPSP YLLAIWTPGE TANSAQPPEQ KCGGKASGKM CFDETCSECN 60
61 SLREANSQTV RGTLLIPCRT AMRGSFPLNG TYFQVNELFA DHESSLKPID VPRDWIWDLP 120
121 RRTVYFGTSV TSIFRGLSTE QIQFCFWKGF VCVRGFEQKT RAPRPLMARL HFPASKLKNN 180
181 KT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
