YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|27894291, gi\|...
Organism:	Homo sapiens
Length:	206 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27894291, gi|....

Description	E-value	Query Range	Subject Range
gi\|114577255, gi... - gi\|114577257\|ref\|XP_001148023.1\| PREDICTED: phosphatidylinositol glycan, class F isoform 3 [Pan trog...	2.0E-67	[1..183]	[1..183]
gi\|123984437, gi... - gi\|123998401\|gb\|ABM86802.1\| phosphatidylinositol glycan anchor biosynthesis, class F [synthetic cons... PIGF - phosphatidylinositol glycan anchor biosynthesis, class F	3.0E-67	[1..183]	[1..183]
gi\|109102846 - gi\|109102846\|ref\|XP_001113130.1\| PREDICTED: similar to phosphatidylinositol glycan, class F isoform ...	2.0E-66	[1..183]	[1..183]
gi\|74222740, gi\|... - gi\|74222740\|dbj\|BAE42236.1\| unnamed protein product [Mus musculus], gi\|22135636\|gb\|AAH28862.1\| Phosp...	3.0E-64	[1..183]	[1..183]
gi\|73969534 - gi\|73969534\|ref\|XP_531809.2\| PREDICTED: similar to phosphatidylinositol glycan, class F isoform 1 is...	6.0E-64	[1..183]	[1..183]
gi\|116004365, gi... - gi\|83405738\|gb\|AAI11282.1\| Phosphatidylinositol glycan anchor biosynthesis, class F [Bos taurus], gi...	9.0E-59	[1..182]	[1..182]
gi\|45387713, gi\|... - gi\|45387713\|ref\|NP_991208.1\| phosphatidylinositol glycan anchor biosynthesis, class F [Danio rerio],...	1.0E-58	[1..183]	[1..183]

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Predicted Domain #1

Region A:
Residues: [1-206]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDNDIKRLL YTHLLCIFSI ILSVFIPSLF LENFSILETH LTWLCICSGF VTAVNLVLYL  60
   61 VVKPNTSSKR SSLSHKVTGF LKCCIYFLMS CFSFHVIFVL YGAPLIELAL ETFLFAVILS 120
  121 TFTTVPCLCL LGPNLKAWLR VFSRNGVTSI WENSLQITTI SSFVGAWLGA LPIPLDWERP 180
  181 WQMTVERKRS TYRSLHVPCR GLGTVK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	79.585027
Match:	PF06699.2
Description:	No description for PF06699.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits